pI: 6.1858 |
Length (AA): 393 |
MW (Da): 43770 |
Paralog Number:
2
Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 0
Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable
Modbase 3D models:
There are 4 models calculated for this protein. More info on
these models, including the
models themselves is available at:
Modbase
Target Beg | Target End | Template | Template Beg | Template End | Identity | Evalue | Model Score | MPQS | zDope |
---|---|---|---|---|---|---|---|---|---|
3 | 206 | 4tql (A) | 21 | 235 | 12.00 | 0.0021 | 0.14 | 0.659384 | -0.69 |
3 | 142 | 5gox (A) | 619 | 760 | 14.00 | 0.22 | 0.13 | 0.403534 | 0.03 |
187 | 276 | 5yz9 (A) | 262 | 352 | 57.00 | 0.00015 | 1 | 0.684308 | 1.82 |
305 | 393 | 5l6d (A) | 368 | 456 | 71.00 | 0 | 1 | 0.908263 | 0.8 |
Help me make sense of these data.
A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.
PDB Structures:
Ortholog group members (OG5_129618)
Species | Accession | Gene Product |
---|---|---|
Arabidopsis thaliana | AT4G10760 | N6-adenosine-methyltransferase MT-A70-like protein |
Babesia bovis | BBOV_III001900 | MT-A70 family protein |
Candida albicans | CaO19.1476 | Activator of IME1 (meiosis) |
Candida albicans | CaO19.9051 | Activator of IME1 (meiosis) |
Drosophila melanogaster | Dmel_CG5933 | Inducer of meiosis 4 |
Echinococcus granulosus | EgrG_000328700 | n6 adenosine methyltransferase ime4 |
Echinococcus granulosus | EgrG_000651200 | n6 adenosine methyltransferase 70 kDa |
Echinococcus granulosus | EgrG_001112100 | N6 adenosine methyltransferase 70 kDa subunit |
Echinococcus multilocularis | EmuJ_000651200 | n6 adenosine methyltransferase 70 kDa |
Echinococcus multilocularis | EmuJ_000328700 | n6 adenosine methyltransferase ime4 |
Homo sapiens | ENSG00000165819 | methyltransferase like 3 |
Mus musculus | ENSMUSG00000022160 | methyltransferase like 3 |
Neospora caninum | NCLIV_062110 | N6-adenosine-methyltransferase 70 kDa subunit, putative |
Oryza sativa | 4330284 | Os02g0672600 |
Plasmodium berghei | PBANKA_0213600 | mRNA (N6-adenosine)-methyltransferase, putative |
Plasmodium falciparum | PF3D7_0729500 | mRNA (N6-adenosine)-methyltransferase, putative |
Plasmodium knowlesi | PKNH_0214400 | mRNA (N6-adenosine)-methyltransferase, putative |
Plasmodium vivax | PVX_081775 | hypothetical protein, conserved |
Plasmodium yoelii | PY01472 | hypothetical protein |
Saccharomyces cerevisiae | YGL192W | Ime4p |
Schistosoma japonicum | Sjp_0047440 | ko:K05925 mRNA (2'-O-methyladenosine-N6-)-methyltransferase [EC2.1.1.62], putative |
Schistosoma mansoni | Smp_146300 | hypothetical protein |
Schmidtea mediterranea | mk4.000368.00 | N6-adenosine-methyltransferase 70 kDa subunit |
Toxoplasma gondii | TGME49_217350 | methyltransferase MTA70, putative |
Trichomonas vaginalis | TVAG_136190 | n6-adenosine-methyltransferase ime4, putative |
Trichomonas vaginalis | TVAG_389630 | n6-adenosine-methyltransferase ime4, putative |
Trichomonas vaginalis | TVAG_002370 | n6-adenosine-methyltransferase ime4, putative |
Trichomonas vaginalis | TVAG_062450 | n6-adenosine-methyltransferase ime4, putative |
Gene/Ortholog | Organism | Phenotype | Source Study |
---|---|---|---|
PBANKA_0213600 | Plasmodium berghei | Essential | plasmo |
TGME49_217350 | Toxoplasma gondii | Probably essential | sidik |
neb | C. elegans RNAi phenotypes | Data obtained from Wormbase WS150, curated by K. Chaudary and T. Carlow, New England Biolabs |
gerdes | Experimental determination and system-level analysis of essential genes in E. coli MG1655 | Gerdes et al., J Bacteriol. 2003 185:5673-84 |
shigen | Profiling of E. coli Chromosome (PEC) | National Institute of Genetics, Japan |
alsford | High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome | Genome Res 2011, 21:915-924 |
yeastgenome | Systematic deletion of yeast genes | Saccharomyces Genome Database |
nmpdr | Genome-scale essentiality datasets from published studies (M. tuberculosis) | National Microbial Pathogen Data Resource |
blattner | Systematic mutagenesis of the E. coli (MG1655) genome | J Bacteriol 2004, 186:4921-4930 |
wormbase | C. elegans RNAi experiments | WormBase web site, http://www.wormbase.org, release WS170 |
keio | Systematic single-gene knock-out mutants of E. coli K12 | The Keio Collection |
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
In any case, if you have information about papers containing relevant validation data for this target, please contact us.