Detailed view for TP02_0697

Basic information

TDR Targets ID: 831656
Theileria parva, calmodulin-domain protein kinase, putative
Source Database / ID: 

pI: 6.7577 | Length (AA): 579 | MW (Da): 66194 | Paralog Number: 0

Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 0

Druggability Group : DG

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

PF00069   Protein kinase domain
PF13833   EF-hand domain pair

Gene Ontology

Mouse over links to read term descriptions.
GO:0005524   ATP binding  
GO:0005509   calcium ion binding  
GO:0004672   protein kinase activity  
GO:0006468   protein amino acid phosphorylation  

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

There are 10 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
4 475 3pvu (A) 72 552 22.00 0 1 0.905099 0.58
117 573 4rgj (A) 39 527 30.00 0 1 1.13719 -0.5
128 418 4fgb (A) 12 299 32.00 0 1 0.995491 -1.35
128 573 3lij (A) 54 514 30.00 0 1 1.17819 -0.7
139 537 5dvr (A) 53 501 36.00 0 1 1.06782 -0.11
184 341 4e7w (A) 78 246 39.00 0 0.87 0.510584 0.07
455 538 5d67 (A) 0 1090 12.00 0 0.56 0.409278 -1.57
508 566 2pmy (A) 8 67 25.00 0.0011 0.67 0.4298 -0.43
509 570 2m97 (A) 1 65 34.00 0.00000000014 0.97 0.570981 -0.89
510 566 2ma2 (A) 428 480 38.00 0.00044 0.93 0.405346 -0.06

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein

Expression

No expression data available for this gene

Orthologs

Ortholog group members (OG5_171215)

Species Accession Gene Product
Babesia bovis BBOV_II007640   calcium-dependent protein kinase, putative
Neospora caninum NCLIV_012150   CAM kinase, CDPK family, putative
Toxoplasma gondii TGME49_237890   calcium-dependent protein kinase CDPK4
Theileria parva TP02_0697   calmodulin-domain protein kinase, putative

Essentiality

TP02_0697 has one or more orthologs with essentiality data
Gene/Ortholog Organism Phenotype Source Study
TGME49_237890 Toxoplasma gondii Essentiality uncertain sidik
Show/Hide essentiality data references
  • neb C. elegans RNAi phenotypes Data obtained from Wormbase WS150, curated by K. Chaudary and T. Carlow, New England Biolabs
  • keio Systematic single-gene knock-out mutants of E. coli K12 The Keio Collection
  • alsford High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome Genome Res 2011, 21:915-924
  • shigen Profiling of E. coli Chromosome (PEC) National Institute of Genetics, Japan
  • sidik A Genome-wide CRISPR Screen in Toxoplasma Identifies Essential Apicomplexan Genes. Sidik, Saima M., et al. "A genome-wide CRISPR screen in toxoplasma identifies essential apicomplexan genes." Cell 166.6 (2016): 1423-1435.
  • gerdes Experimental determination and system-level analysis of essential genes in E. coli MG1655 Gerdes et al., J Bacteriol. 2003 185:5673-84
  • blattner Systematic mutagenesis of the E. coli (MG1655) genome J Bacteriol 2004, 186:4921-4930
  • goodall The Essential Genome of Escherichia coli K-12 (Transposon directed high-throughput mutagenesis) Goodall, Emily CA, et al. "The essential genome of Escherichia coli K-12." mBio 9.1 (2018): e02096-17.
  • wormbase C. elegans RNAi experiments WormBase web site, http://www.wormbase.org, release WS170
  • yeastgenome Systematic deletion of yeast genes Saccharomyces Genome Database
  • plasmo Functional Profiling of a Plasmodium Genome Reveals an Abundance of Essential Genes. Bushell, Ellen, et al. "Functional profiling of a Plasmodium genome reveals an abundance of essential genes." Cell 170.2 (2017): 260-272.
  • nmpdr Genome-scale essentiality datasets from published studies (M. tuberculosis) National Microbial Pathogen Data Resource

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Non orthologous druggable targets
By sequence similarity to non orthologous druggable targets
Species Target Length Identity Alignment span Linked Drugs Reference
Zea mays CaM kinase I alpha 492 aa 30.2% 444 aa Compounds References
Rattus norvegicus Serine/threonine-protein kinase pim-3 326 aa 23.6% 313 aa Compounds References
Plasmodium falciparum (isolate 3D7) Cell division control protein 2 homolog 288 aa 26.8% 287 aa Compounds References
Rattus norvegicus Mitogen-activated protein kinase 1 358 aa 25.2% 305 aa Compounds References
Plasmodium falciparum (isolate 3D7) Calcium-dependent protein kinase 4 528 aa 31.9% 454 aa Compounds References
Rattus norvegicus MAP kinase p38 alpha 360 aa 25.5% 322 aa Compounds References
Triticum aestivum Calcium dependent protein kinase 548 aa 28.7% 477 aa Compounds References
Rattus norvegicus Cell division protein kinase 5 292 aa 26.7% 285 aa Compounds References
Obtained from network model
No druggable targets predicted through repurposing network model

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier TP02_0697 (Theileria parva), calmodulin-domain protein kinase, putative
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