pI: 6.4284 |
Length (AA): 724 |
MW (Da): 82351 |
Paralog Number:
0
Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 0
Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable
Modbase 3D models:
There are 4 models calculated for this protein. More info on
these models, including the
models themselves is available at:
Modbase
Target Beg | Target End | Template | Template Beg | Template End | Identity | Evalue | Model Score | MPQS | zDope |
---|---|---|---|---|---|---|---|---|---|
62 | 722 | 5tth (A) | 86 | 738 | 41.00 | 0 | 1 | 1.28498 | 0.08 |
70 | 286 | 3ied (A) | 93 | 333 | 45.00 | 0 | 1 | 0.875824 | -0.96 |
75 | 298 | 3k60 (A) | 2 | 310 | 41.00 | 0 | 1 | 0.869392 | -1.2 |
79 | 557 | 5y3n (A) | 88 | 552 | 45.00 | 0 | 1 | 1.0847 | -0.43 |
Help me make sense of these data.
A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.
PDB Structures:
Ortholog group members (OG5_129844)
Species | Accession | Gene Product |
---|---|---|
Babesia bovis | BBOV_IV010880 | heat shock protein 75, putative |
Brugia malayi | Bm1_20215 | Hsp90 protein |
Caenorhabditis elegans | CELE_R151.7 | Protein R151.7, isoform B |
Dictyostelium discoideum | DDB_G0276947 | heat shock protein Hsp90 family protein |
Drosophila melanogaster | Dmel_CG3152 | CG3152 gene product from transcript CG3152-RA |
Echinococcus granulosus | EgrG_000866600 | heat shock protein 75 kDa mitochondrial |
Echinococcus multilocularis | EmuJ_000866600 | heat shock protein 75 kDa, mitochondrial |
Homo sapiens | ENSG00000126602 | TNF receptor-associated protein 1 |
Leishmania braziliensis | LbrM.33.2670 | heat shock protein, putative |
Leishmania donovani | LdBPK_332520.1 | heat shock protein, putative |
Leishmania infantum | LinJ.33.2520 | heat shock protein, putative |
Leishmania major | LmjF.33.2390 | heat shock protein, putative |
Leishmania mexicana | LmxM.32.2390 | heat shock protein, putative |
Loa Loa (eye worm) | LOAG_05810 | heat shock protein 75 |
Mus musculus | ENSMUSG00000005981 | TNF receptor-associated protein 1 |
Neospora caninum | NCLIV_000010 | heat shock protein 90, putative |
Onchocerca volvulus | OVOC9277 | Heat shock protein 75 kDa, mitochondrial homolog |
Plasmodium berghei | PBANKA_0929900 | heat shock protein 90, putative |
Plasmodium falciparum | PF3D7_1118200 | heat shock protein 90, putative |
Plasmodium knowlesi | PKNH_0915900 | heat shock protein 90, putative |
Plasmodium vivax | PVX_091545 | heat shock protein 90, putative |
Plasmodium yoelii | PY05217 | Hsp90-related |
Schistosoma japonicum | Sjp_0300620 | ko:K09488 TNF receptor-associated protein 1, putative |
Schistosoma mansoni | Smp_155740 | heat shock protein |
Schmidtea mediterranea | mk4.019078.00 | Heat shock protein 75 kDa, mitochondrial |
Schmidtea mediterranea | mk4.072099.00 | Heat shock protein 90 |
Schmidtea mediterranea | mk4.018361.00 | Heat shock protein 75 kDa, mitochondrial |
Trypanosoma brucei gambiense | Tbg972.11.2900 | heat shock protein, mitochondrial precursor, putative,TNFR-associated protein 1 |
Trypanosoma brucei | Tb927.11.2650 | heat shock protein 84, putative |
Trypanosoma congolense | TcIL3000.11.2400 | heat shock protein, mitochondrial precursor, putative |
Trypanosoma cruzi | TcCLB.504153.310 | heat shock protein, putative |
Toxoplasma gondii | TGME49_292920 | heat shock protein 75, putative |
Theileria parva | TP01_0753 | heat shock protein 75, putative |
Gene/Ortholog | Organism | Phenotype | Source Study |
---|---|---|---|
Tb11.02.0250 | Trypanosoma brucei | no significant loss or gain of fitness in bloodstream forms (3 days) | alsford |
Tb11.02.0250 | Trypanosoma brucei | no significant loss or gain of fitness in bloodstream forms (6 days) | alsford |
Tb11.02.0250 | Trypanosoma brucei | significant loss of fitness in procyclic forms | alsford |
Tb11.02.0250 | Trypanosoma brucei | significant loss of fitness in differentiation of procyclic to bloodstream forms | alsford |
TGME49_292920 | Toxoplasma gondii | Probably essential | sidik |
nmpdr | Genome-scale essentiality datasets from published studies (M. tuberculosis) | National Microbial Pathogen Data Resource |
alsford | High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome | Genome Res 2011, 21:915-924 |
shigen | Profiling of E. coli Chromosome (PEC) | National Institute of Genetics, Japan |
keio | Systematic single-gene knock-out mutants of E. coli K12 | The Keio Collection |
neb | C. elegans RNAi phenotypes | Data obtained from Wormbase WS150, curated by K. Chaudary and T. Carlow, New England Biolabs |
blattner | Systematic mutagenesis of the E. coli (MG1655) genome | J Bacteriol 2004, 186:4921-4930 |
gerdes | Experimental determination and system-level analysis of essential genes in E. coli MG1655 | Gerdes et al., J Bacteriol. 2003 185:5673-84 |
wormbase | C. elegans RNAi experiments | WormBase web site, http://www.wormbase.org, release WS170 |
yeastgenome | Systematic deletion of yeast genes | Saccharomyces Genome Database |
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
In any case, if you have information about papers containing relevant validation data for this target, please contact us.
Species | Known druggable target | Linked compounds | Reference |
---|---|---|---|
Plasmodium falciparum | heat shock protein 90, putative | Compounds | References |
Homo sapiens | TNF receptor-associated protein 1 | Compounds | References |