Detailed view for EmuJ_000827600

Basic information

TDR Targets ID: 957218
Echinococcus multilocularis, leucine rich repeat and fibronectin type III
Source Database / ID:  GeneDB

pI: 8.8614 | Length (AA): 1013 | MW (Da): 111955 | Paralog Number: 0

Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 1

Druggability Group : DG2

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

PF00560   Leucine Rich Repeat
PF13855   Leucine rich repeat

Gene Ontology

Mouse over links to read term descriptions.
GO:0005515   protein binding  

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

There are 15 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
1 206 5hz0 (B) 157 382 31.00 0.00039 0.99 0.353656 0.42
13 151 4mn8 (B) 45 183 36.00 0.0011 0.96 0.222516 0.54
30 92 2v9t (B) 273 335 19.00 0.15 0.44 0.204392 0.19
44 237 5lfn (A) 131 314 33.00 0.0000000035 1 0.57681 -0.92
48 371 2xot (A) 52 340 33.00 0.000009 1 0.359142 0.74
84 242 3wo9 (A) 69 216 32.00 0.00000021 0.99 0.57226 -1.03
87 237 4k5u (B) 36 175 34.00 0.00002 1 0.567362 -0.95
92 237 4bv4 (R) 329 439 38.00 0.002 0.99 0.251426 -0.05
100 146 2bnh (A) 71 121 49.00 0.15 1 0.582697 -0.53
110 237 5wk4 (D) 54 170 34.00 0.000099 0.91 0.506657 -0.86
124 241 2wfh (A) 768 877 29.00 0.000012 0.87 0.490786 -0.94
159 237 2ifg (A) 88 162 44.00 0.0019 1 0.489286 0.22
302 390 1qa9 (B) 3 94 17.00 0 0.59 0.136358 -0.2
305 371 1evt (C) 266 341 35.00 0.87 0.24 -0.0175598 1.51
526 632 2mqa (A) 25 131 16.00 0 0.04 0.193127 -0.24

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein

Expression

No expression data available for this gene

Orthologs

Ortholog group members (OG5_149294)

Species Accession Gene Product
Drosophila melanogaster Dmel_CG1804   CG1804 gene product from transcript CG1804-RA
Echinococcus multilocularis EmuJ_000827600   leucine rich repeat and fibronectin type III

Essentiality

No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Non orthologous druggable targets
By sequence similarity to non orthologous druggable targets
No additional associated druggable targets
Obtained from network model
No druggable targets predicted through repurposing network model

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier EmuJ_000827600 (Echinococcus multilocularis), leucine rich repeat and fibronectin type III
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