Detailed view for EmuJ_000663800

Basic information

TDR Targets ID: 961661
Echinococcus multilocularis, twist protein
Source Database / ID:  GeneDB

pI: 8.2813 | Length (AA): 255 | MW (Da): 28644 | Paralog Number: 0

Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 0

Druggability Group : DG2

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

PF00010   Helix-loop-helix DNA-binding domain

Gene Ontology

Mouse over links to read term descriptions.
GO:0046983   protein dimerization activity  

Metabolic Pathways

Proteoglycans in cancer (KEGG)

Structural information

Modbase 3D models:

There are 3 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
117 182 2ypa (A) 182 248 52.00 0.9 1 0.921424 -0.8
122 178 2ql2 (B) 101 158 49.00 0.00000023 1 0.855029 -0.6
131 175 5gnj (G) 457 499 42.00 0.11 0.94 0.798971 -1.57

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein

Expression

No expression data available for this gene

Orthologs

Ortholog group members (OG5_131831)

Species Accession Gene Product
Brugia malayi Bm1_44690   Twist related protein
Caenorhabditis elegans CELE_C02B8.4   Protein HLH-8
Drosophila melanogaster Dmel_CG2956   twist
Echinococcus granulosus EgrG_000663800   twist protein
Echinococcus multilocularis EmuJ_000663800   twist protein
Homo sapiens ENSG00000122691   twist family bHLH transcription factor 1
Homo sapiens ENSG00000233608   twist family bHLH transcription factor 2
Loa Loa (eye worm) LOAG_10057   twist 1
Mus musculus ENSMUSG00000007805   twist basic helix-loop-helix transcription factor 2
Mus musculus ENSMUSG00000035799   twist basic helix-loop-helix transcription factor 1
Oryza sativa 4333691   Os03g0671800
Schistosoma japonicum Sjp_0042560   ko:K09069 twist, putative
Schmidtea mediterranea mk4.002532.01   Twist-related protein

Essentiality

No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Non orthologous druggable targets
By sequence similarity to non orthologous druggable targets
No additional associated druggable targets
Obtained from network model
No druggable targets predicted through repurposing network model

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier EmuJ_000663800 (Echinococcus multilocularis), twist protein
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