Detailed view for Sjp_0113400

Basic information

TDR Targets ID: 970519
Schistosoma japonicum, ko:K09093 aryl hydrocarbon receptor, putative
Source Database / ID:  Wormbase Parasite  

pI: 8.6871 | Length (AA): 275 | MW (Da): 31376 | Paralog Number: 1

Signal peptide: N | GPI Anchor: | Predicted trans-membrane segments: 0

Druggability Group : DG

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

PF00010   Helix-loop-helix DNA-binding domain

Gene Ontology

Mouse over links to read term descriptions.
GO:0046983   protein dimerization activity  

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

There are 3 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
22 196 5nj8 (A) 34 265 50.00 0 1 0.942986 0.29
25 243 5y7y (A) 38 277 38.00 0 1 0.97487 0.68
108 198 4m4x (A) 150 259 58.00 0 0.99 0.682717 1.12

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein

Expression

No expression data available for this gene

Orthologs

Ortholog group members (OG5_133500)

Species Accession Gene Product
Brugia malayi Bm1_19565   aryl hydrocarbon receptor AHR-1
Caenorhabditis elegans CELE_C41G7.5   Protein AHR-1, isoform A
Drosophila melanogaster Dmel_CG6993   spineless
Echinococcus granulosus EgrG_000434100   aryl hydrocarbon receptor
Echinococcus multilocularis EmuJ_000434100   aryl hydrocarbon receptor
Homo sapiens ENSG00000106546   aryl hydrocarbon receptor
Loa Loa (eye worm) LOAG_12969   hypothetical protein
Loa Loa (eye worm) LOAG_15014   hypothetical protein
Loa Loa (eye worm) LOAG_12021   hypothetical protein
Mus musculus ENSMUSG00000019256   aryl-hydrocarbon receptor
Onchocerca volvulus OVOC105  
Schistosoma japonicum Sjp_0113400   ko:K09093 aryl hydrocarbon receptor, putative
Schistosoma japonicum Sjp_0129120   IPR001189,Manganese and iron superoxide dismutase,domain-containing
Schistosoma mansoni Smp_168600   aryl hydrocarbon receptor
Schmidtea mediterranea mk4.002805.00  
Schmidtea mediterranea mk4.002805.01   Aryl hydrocarbon receptor protein 1

Essentiality

No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Species Known druggable target Linked compounds Reference
Oryctolagus cuniculus Aryl hydrocarbon receptor Compounds References
Rattus norvegicus Aryl hydrocarbon receptor Compounds References
Homo sapiens aryl hydrocarbon receptor Compounds References
Mus musculus aryl-hydrocarbon receptor Compounds References
By sequence similarity to non orthologous druggable targets
No additional associated druggable targets
Obtained from network model
No druggable targets predicted through repurposing network model

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier Sjp_0113400 (Schistosoma japonicum), ko:K09093 aryl hydrocarbon receptor, putative
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