Detailed view for Sjp_0025790

Basic information

TDR Targets ID: 971394
Schistosoma japonicum, Tyrosine-protein phosphatase 99A precursor, putative
Source Database / ID:  Wormbase Parasite  

pI: 7.2174 | Length (AA): 1288 | MW (Da): 145739 | Paralog Number: 0

Signal peptide: N | GPI Anchor: | Predicted trans-membrane segments: 1

Druggability Group : DG

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

PF00041   Fibronectin type III domain
PF00102   Protein-tyrosine phosphatase

Gene Ontology

Mouse over links to read term descriptions.
GO:0016791   phosphoric monoester hydrolase activity  
GO:0005515   protein binding  
GO:0004725   protein tyrosine phosphatase activity  
GO:0016311   dephosphorylation  
GO:0006470   protein amino acid dephosphorylation  

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

There are 13 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
9 83 1uen (A) 40 119 35.00 0.14 1 0.305748 0.45
79 190 2e7h (A) 2 108 26.00 0 0.99 0.398942 -0.33
85 181 4wtx (A) 1574 1665 23.00 0 0.97 0.489552 -1.55
96 181 2ee2 (A) 31 111 31.00 0.061 0.99 0.4391 -0.51
384 621 2nz6 (A) 0 1294 33.00 0 0.97 0.248614 -0.13
389 815 2fh7 (A) 1369 1923 33.00 0 1 0.245122 0.37
392 613 5awx (A) 1698 1979 50.00 0 1 0.286365 0.36
417 829 1ygr (A) 651 1204 32.00 0 1 0.246391 0.41
427 612 2bv5 (A) 308 517 39.00 0 0.99 0.28003 -0.16
429 613 3zm1 (A) 285 508 32.00 0 0.91 0.416371 -0.37
900 933 3bog (C) 3 69 99.99 0 0 1.03962 -0.2
1012 1310 1zp2 (A) 18 232 23.00 0 1 0.0959311 0.59
1227 1312 1c9b (A) 231 312 20.00 0 0.66 0.3302 -0.6

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein

Expression

No expression data available for this gene

Orthologs

Ortholog group members (OG5_130306)

Species Accession Gene Product
Drosophila melanogaster Dmel_CG11516   Protein tyrosine phosphatase 99A
Echinococcus granulosus EgrG_000149750   receptor type tyrosine protein phosphatase zeta
Entamoeba histolytica EHI_049430   protein tyrosine phosphatase, putative
Echinococcus multilocularis EmuJ_000149750   receptor type tyrosine protein phosphatase zeta
Homo sapiens ENSG00000144724   protein tyrosine phosphatase, receptor type, G
Homo sapiens ENSG00000106278   protein tyrosine phosphatase, receptor-type, Z polypeptide 1
Mus musculus ENSMUSG00000021745   protein tyrosine phosphatase, receptor type, G
Mus musculus ENSMUSG00000068748   protein tyrosine phosphatase, receptor type Z, polypeptide 1
Saccharomyces cerevisiae YDL230W   Ptp1p
Schistosoma japonicum Sjp_0025790   Tyrosine-protein phosphatase 99A precursor, putative
Schistosoma mansoni Smp_152750   receptor protein tyrosine phosphatase
Schmidtea mediterranea mk4.005466.00  
Schmidtea mediterranea mk4.000476.09   Probable methyltransferase-like protein 15

Essentiality

No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Species Known druggable target Linked compounds Reference
Homo sapiens protein tyrosine phosphatase, receptor type, G Compounds References
Saccharomyces cerevisiae Ptp1p Compounds References
By sequence similarity to non orthologous druggable targets
No additional associated druggable targets
Obtained from network model
No druggable targets predicted through repurposing network model

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier Sjp_0025790 (Schistosoma japonicum), Tyrosine-protein phosphatase 99A precursor, putative
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