Detailed view for OVOC11820

Basic information

TDR Targets ID: 989707
Onchocerca volvulus, Carnitine O-palmitoyltransferase 2, mitochondrial homolog
Source Database / ID:  Wormbase Parasite  

pI: 7.2317 | Length (AA): 623 | MW (Da): 71103 | Paralog Number: 8169

Signal peptide: N | GPI Anchor: | Predicted trans-membrane segments: 0

Druggability Group : DG1

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

No Pfam domain information for this protein.

Gene Ontology

Mouse over links to read term descriptions.
No GO information for this protein.

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

There are 3 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
4 91 5u95 (A) 189 279 32.00 0.46 0.25 0.184451 1.08
32 648 2deb (A) 34 647 42.00 0 1 1.54188 -1.12
42 653 1ndb (A) 30 619 27.00 0 1 1.25825 -0.56

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein

Expression

No expression data available for this gene

Orthologs

This protein does not belong to any OrthoMCL cluster.

Essentiality

No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Non orthologous druggable targets
By sequence similarity to non orthologous druggable targets
Species Target Length Identity Alignment span Linked Drugs Reference
Rattus norvegicus Acetylcholinesterase 614 aa 39.7% 531 aa Compounds References
Bos taurus Acetylcholinesterase 613 aa 39.9% 511 aa Compounds References
Rattus norvegicus Butyrylcholinesterase 597 aa 38.1% 554 aa Compounds References
Sus scrofa Carboxylesterase 566 aa 29.4% 558 aa Compounds References
Rattus norvegicus Liver carboxylesterase B-1 561 aa 27.4% 559 aa Compounds References
Torpedo californica Acetylcholinesterase 586 aa 37.7% 552 aa Compounds References
Equus caballus Butyrylcholinesterase 602 aa 35.9% 554 aa Compounds References
Equus caballus Cholinesterase 574 aa 36.1% 554 aa Compounds References
Chilo suppressalis Esterase 503 aa 27.0% 534 aa Compounds References
Bos taurus Cholesterol esterase 597 aa 28.4% 570 aa Compounds References
Oryctolagus cuniculus Acyl coenzyme A:cholesterol acyltransferase 565 aa 27.6% 539 aa Compounds References
Loxostege sticticalis Carboxylesterase 615 aa 27.1% 513 aa Compounds References
Laodelphax striatella Acetylcholinesterase 426 aa 36.6% 369 aa Compounds References
Obtained from network model
No druggable targets predicted through repurposing network model

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier OVOC11820 (Onchocerca volvulus), Carnitine O-palmitoyltransferase 2, mitochondrial homolog
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