Detailed information for compound 215341

Basic information

Technical information
  • TDR Targets ID: 215341
  • Name: 4-fluorobenzamide
  • MW: 139.127 | Formula: C7H6FNO
  • H donors: 1 H acceptors: 1 LogP: 0.9 Rotable bonds: 1
    Rule of 5 violations (Lipinski): 1
  • SMILES: NC(=O)c1ccc(cc1)F
  • InChi: 1S/C7H6FNO/c8-6-3-1-5(2-4-6)7(9)10/h1-4H,(H2,9,10)
  • InChiKey: VNDHYTGVCGVETQ-UHFFFAOYSA-N  

Network

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Synonyms

  • 824-75-9
  • ZINC00407004
  • 4-09-00-00954 (Beilstein Handbook Reference)
  • BRN 1859744
  • Benzamide, 4-fluoro-
  • Benzamide, p-fluoro-
  • EINECS 212-535-9
  • p-Fluorobenzamide
  • p-Fluorobenzoic acid amide
  • STK301243
  • MLS000060705
  • SMR000065508
  • NSC102765

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens GNAS complex locus Starlite/ChEMBL No references
Escherichia coli penicillin-binding protein Starlite/ChEMBL No references

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) Get druggable targets OG5_131088 All targets in OG5_131088
Schistosoma japonicum ko:K04632 guanine nucleotide binding protein (G protein), alpha stimulating, putative Get druggable targets OG5_131088 All targets in OG5_131088
Brugia malayi GTP-binding regulatory protein Gs alpha-S chain, putative Get druggable targets OG5_131088 All targets in OG5_131088
Loa Loa (eye worm) GTP-binding regulatory protein Gs alpha-S chain Get druggable targets OG5_131088 All targets in OG5_131088
Echinococcus multilocularis guanine nucleotide binding protein G(s) subunit Get druggable targets OG5_131088 All targets in OG5_131088
Echinococcus multilocularis guanine nucleotide binding protein G(s) subunit Get druggable targets OG5_131088 All targets in OG5_131088
Mycobacterium tuberculosis Possible penicillin-binding protein Get druggable targets OG5_149948 All targets in OG5_149948
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) Get druggable targets OG5_131088 All targets in OG5_131088
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) Get druggable targets OG5_131088 All targets in OG5_131088
Echinococcus granulosus guanine nucleotide binding protein Gs subunit Get druggable targets OG5_131088 All targets in OG5_131088
Echinococcus granulosus guanine nucleotide binding protein Gs subunit Get druggable targets OG5_131088 All targets in OG5_131088

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Schistosoma mansoni GTP-binding protein alpha subunit gna GNAS complex locus 394 aa 450 aa 28.7 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Echinococcus granulosus microtubule associated protein 2 0.0717 0.7266 0.875
Loa Loa (eye worm) hypothetical protein 0.0179 0.078 0.1344
Schistosoma mansoni hypothetical protein 0.0233 0.1421 0.1421
Schistosoma mansoni microtubule-associated protein tau 0.0717 0.7266 0.7266
Echinococcus multilocularis microtubule associated protein 2 0.0717 0.7266 0.875
Leishmania major hypothetical protein, conserved 0.0231 0.1404 0.5
Echinococcus multilocularis ryanodine receptor 44f 0.0764 0.7833 1
Echinococcus granulosus ryanodine receptor 44f 0.0764 0.7833 1
Mycobacterium tuberculosis Possible penicillin-binding protein 0.0278 0.1968 0.5
Schistosoma mansoni ryanodine receptor related 0.0943 1 1
Loa Loa (eye worm) ryanodine receptor 0.0223 0.13 0.224
Loa Loa (eye worm) hypothetical protein 0.0596 0.5805 1
Trypanosoma cruzi inositol 1,4,5-trisphosphate receptor, putative 0.034 0.2719 0.5
Loa Loa (eye worm) hypothetical protein 0.0172 0.069 0.1189
Echinococcus multilocularis ryanodine receptor 44f 0.0596 0.5805 0.5532
Trypanosoma brucei inositol 1,4,5-trisphosphate receptor 0.034 0.2719 0.5
Echinococcus granulosus ryanodine receptor 44f 0.0596 0.5805 0.5532
Schistosoma mansoni inositol 145-trisphosphate receptor 0.0288 0.2094 0.2094
Loa Loa (eye worm) ryanodine receptor 0.0352 0.2867 0.4938

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) > 50 um PUBCHEM_BIOASSAY: Estrogen Receptor-alpha Coactivator Binding Inhibitors Dose Response Confirmation. (Class of assay: confirmatory) [Related pubchem assays: 629 (Primary screen preceding this dose response confirmation assay.)] ChEMBL. No reference
IC50 (binding) = 200 uM The compound was tested for poly(ADP-ribose)polymerase (PARP) inhibition ChEMBL. 11689065
IC50 (binding) = 200 uM The compound was tested for poly(ADP-ribose)polymerase (PARP) inhibition ChEMBL. 11689065
Log Phep (ADMET) = -2.34 Partition coefficient of compound was measured in haptane/water system ChEMBL. 8254605
log(1/K) (binding) = -2.6 Binding affinity to alcohol dehydrogenase (unknown origin) ChEMBL. 1246029
logP (ADMET) = 0.96 Partition coefficient (logP) ChEMBL. 8254605
logP (ADMET) = 1 Partition coefficient (logP) ChEMBL. 8254605
Potency (functional) = 0.7079 um PUBCHEM_BIOASSAY: qHTS Inhibitors of AmpC Beta-Lactamase (assay with detergent). (Class of assay: confirmatory) [Related pubchem assays: 1002 (Confirmation Concentration-Response Assay for Inhibitors of AmpC Beta-Lactamase (assay with detergent)), 585 (Promiscuous and Specific Inhibitors of AmpC Beta-Lactamase (assay without detergent) - a screen old NIH MLSMR collection), 584 (Promiscuous and Specific Inhibitors of AmpC Beta-Lactamase (assay with detergent) - a screen of the old NIH MLSMR collection), 1003 (Confirmation Cuvette-Based Assay for Inhibitors of AmpC Beta-Lactamase (assay with detergent))] ChEMBL. No reference
Potency (functional) 10 uM PubChem BioAssay. qHTS for Agonist of gsp, the Etiologic Mutation Responsible for Fibrous Dysplasia/McCune-Albright Syndrome: qHTS. (Class of assay: confirmatory) ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

3 literature references were collected for this gene.

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