Detailed information for compound 251772

Basic information

Technical information
  • TDR Targets ID: 251772
  • Name: (2R,4S)-1-(4-butoxyphenyl)sulfonyl-N-hydroxy- 4-[[(2S)-2-hydroxy-4-methylpentanoyl]amino]py rrolidine-2-carboxamide
  • MW: 471.568 | Formula: C21H33N3O7S
  • H donors: 4 H acceptors: 6 LogP: 1.76 Rotable bonds: 13
    Rule of 5 violations (Lipinski): 1
  • SMILES: CCCCOc1ccc(cc1)S(=O)(=O)N1C[C@H](C[C@@H]1C(=O)NO)NC(=O)[C@H](CC(C)C)O
  • InChi: 1S/C21H33N3O7S/c1-4-5-10-31-16-6-8-17(9-7-16)32(29,30)24-13-15(12-18(24)20(26)23-28)22-21(27)19(25)11-14(2)3/h6-9,14-15,18-19,25,28H,4-5,10-13H2,1-3H3,(H,22,27)(H,23,26)/t15-,18+,19-/m0/s1
  • InChiKey: FMYMFUHWQBEETO-IPELMVKDSA-N  


Substructure search Similarity search

Network

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Synonyms

  • (2S)-N-[(3S,5R)-1-(4-butoxyphenyl)sulfonyl-5-(hydroxycarbamoyl)pyrrolidin-3-yl]-2-hydroxy-4-methyl-pentanamide
  • (2S)-N-[(3S,5R)-1-(4-butoxyphenyl)sulfonyl-5-[(hydroxyamino)-oxomethyl]-3-pyrrolidinyl]-2-hydroxy-4-methylpentanamide
  • (2R,4S)-1-(4-butoxyphenyl)sulfonyl-N-hydroxy-4-[[(2S)-2-hydroxy-4-methyl-pentanoyl]amino]pyrrolidine-2-carboxamide
  • (2S)-N-[(3S,5R)-1-(4-butoxyphenyl)sulfonyl-5-(hydroxycarbamoyl)pyrrolidin-3-yl]-2-hydroxy-4-methyl-valeramide

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens matrix metallopeptidase 13 (collagenase 3) Starlite/ChEMBL References
Homo sapiens matrix metallopeptidase 1 (interstitial collagenase) Starlite/ChEMBL References
Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase) Starlite/ChEMBL References
Homo sapiens matrix metallopeptidase 7 (matrilysin, uterine) Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Brugia malayi Matrixin family protein matrix metallopeptidase 1 (interstitial collagenase) 403 aa 401 aa 27.7 %
Echinococcus granulosus matrix metallopeptidase 7 M10 family matrix metallopeptidase 13 (collagenase 3) 471 aa 448 aa 34.1 %
Echinococcus granulosus matrix metallopeptidase 7 M10 family matrix metallopeptidase 7 (matrilysin, uterine) 267 aa 234 aa 41.0 %
Echinococcus granulosus matrix metallopeptidase 7 M10 family matrix metallopeptidase 3 (stromelysin 1, progelatinase) 477 aa 431 aa 34.6 %
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Trichomonas vaginalis ras-dva small GTPase, putative 0.0311 0.614 0.5
Onchocerca volvulus Matrix metalloproteinase homolog 0.0253 0.194 0.5
Trichomonas vaginalis rap1 and, putative 0.0311 0.614 0.5
Brugia malayi Ras-related protein R-Ras2 0.0311 0.614 1
Entamoeba histolytica ras-1, putative 0.0311 0.614 0.5
Entamoeba histolytica Ras family GTPase 0.0311 0.614 0.5
Echinococcus multilocularis matrix metallopeptidase 7 (M10 family) 0.0365 1 1
Loa Loa (eye worm) hypothetical protein 0.0311 0.614 1
Brugia malayi Ras protein let-60 0.0311 0.614 1
Trichomonas vaginalis dexras1, putative 0.0311 0.614 0.5
Trichomonas vaginalis ral, putative 0.0311 0.614 0.5
Loa Loa (eye worm) Ras protein let-60 0.0311 0.614 1
Trichomonas vaginalis rheb, putative 0.0311 0.614 0.5
Loa Loa (eye worm) matrixin family protein 0.0253 0.194 0.316
Entamoeba histolytica Ras family GTPase 0.0311 0.614 0.5
Trichomonas vaginalis GTP-binding protein rit, putative 0.0311 0.614 0.5
Onchocerca volvulus Matrilysin homolog 0.0253 0.194 0.5

Activities

Activity type Activity value Assay description Source Reference
% absorbed (ADMET) = 3 % % absorption predicted from in vitro rat ileum transport studies ChEMBL. 11150165
IC50 (binding) = 0.9 nM In vitro inhibitory activity against human recombinant matrix metalloproteinase-13 (collagenase-3) ChEMBL. 11150165
IC50 (binding) = 0.9 nM In vitro inhibitory activity against human recombinant matrix metalloproteinase-13 (collagenase-3) ChEMBL. 11150165
IC50 (binding) = 10 nM In vitro inhibitory activity against matrix metalloproteinase -3 (stromelysin) ChEMBL. 11150165
IC50 (binding) = 10 nM In vitro inhibitory activity against matrix metalloproteinase -3 (stromelysin) ChEMBL. 11150165
IC50 (binding) = 440 nM In vitro inhibitory activity against matrix metalloproteinase -1 (collagenase-1) ChEMBL. 11150165
IC50 (binding) = 440 nM In vitro inhibitory activity against matrix metalloproteinase -1 (collagenase-1) ChEMBL. 11150165
IC50 (binding) = 2400 nM In vitro inhibitory activity against matrix metalloproteinase-7 (matrilysin, MMP-7) ChEMBL. 11150165
IC50 (binding) = 2400 nM In vitro inhibitory activity against matrix metalloproteinase-7 (matrilysin, MMP-7) ChEMBL. 11150165

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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