Detailed information for compound 251900

Basic information

Technical information
  • TDR Targets ID: 251900
  • Name: 6-(4-hexylphenyl)-3-[(2R,4S,5R)-4-hydroxy-5-( hydroxymethyl)oxolan-2-yl]furo[2,3-d]pyrimidi n-2-one
  • MW: 412.479 | Formula: C23H28N2O5
  • H donors: 2 H acceptors: 3 LogP: 4.07 Rotable bonds: 8
    Rule of 5 violations (Lipinski): 1
  • SMILES: CCCCCCc1ccc(cc1)c1cc2c(o1)nc(=O)n(c2)[C@H]1C[C@@H]([C@H](O1)CO)O
  • InChi: 1S/C23H28N2O5/c1-2-3-4-5-6-15-7-9-16(10-8-15)19-11-17-13-25(23(28)24-22(17)30-19)21-12-18(27)20(14-26)29-21/h7-11,13,18,20-21,26-27H,2-6,12,14H2,1H3/t18-,20+,21+/m0/s1
  • InChiKey: JPXRLDXGFYDISB-CEWLAPEOSA-N  


Substructure search Similarity search

Network

Hover on a compound node to display the structore

Synonyms

  • 6-(4-hexylphenyl)-3-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]furo[2,3-d]pyrimidin-2-one
  • 6-(4-hexylphenyl)-3-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)-2-tetrahydrofuranyl]-2-furo[2,3-d]pyrimidinone
  • 6-(4-hexylphenyl)-3-[(2R,4S,5R)-4-hydroxy-5-methylol-tetrahydrofuran-2-yl]furo[2,3-d]pyrimidin-2-one
  • 6-(4-Hexyl-phenyl)-3-((2R,4S,5R)-4-hydroxy-5-hydroxymethyl-tetrahydro-furan-2-yl)-3H-furo[2,3-d]pyrimidin-2-one
  • AIDS-122948
  • AIDS122948
  • Cf1742

Targets

Known targets for this compound

No curated genes were found associated with this compound

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Trichomonas vaginalis protein farnesyltransferase alpha subunit/RAB geranylgeranyl transferase alpha subunit, putative 0.0878 0.1396 0.701
Schistosoma mansoni rab geranylgeranyl transferase alpha subunit 0.0307 0.0448 0.2272
Schistosoma mansoni carbonic anhydrase-related 0.0318 0.0466 0.2371
Brugia malayi Probable protein farnesyltransferase beta subunit, putative 0.0157 0.0198 0.1041
Loa Loa (eye worm) hypothetical protein 0.0049 0.0019 0.0097
Schistosoma mansoni tyrosine kinase 0.0663 0.1039 0.5404
Schistosoma mansoni tyrosine kinase 0.0356 0.0529 0.2703
Schistosoma mansoni tyrosine kinase 0.0352 0.0523 0.267
Trypanosoma brucei Protein prenyltransferase alpha subunit repeat, putative 0.0307 0.0448 0.3477
Brugia malayi Eukaryotic-type carbonic anhydrase family protein 0.0588 0.0915 0.4797
Loa Loa (eye worm) hypothetical protein 0.0318 0.0466 0.2445
Echinococcus granulosus carbonic anhydrase 0.0318 0.0466 0.2259
Echinococcus granulosus protein farnesyltransferase subunit beta 0.058 0.0902 0.4598
Echinococcus multilocularis carbonic anhydrase 0.0318 0.0466 0.2259
Schistosoma mansoni thyroid hormone receptor 0.0147 0.0181 0.086
Echinococcus granulosus carbonic anhydrase II 0.0588 0.0915 0.4668
Toxoplasma gondii hypothetical protein 0.0318 0.0466 0.2237
Trypanosoma cruzi protein farnesyltransferase, putative 0.058 0.0902 0.9816
Brugia malayi Protein prenyltransferase alpha subunit repeat containing protein 0.0307 0.0448 0.2347
Brugia malayi Prenyltransferase and squalene oxidase repeat family protein 0.058 0.0902 0.4728
Brugia malayi Eukaryotic-type carbonic anhydrase family protein 0.0318 0.0466 0.2445
Toxoplasma gondii hypothetical protein 0.0878 0.1396 1
Loa Loa (eye worm) hypothetical protein 0.1185 0.1907 1
Echinococcus multilocularis geranylgeranyl transferase type 2 subunit alpha 0.0307 0.0448 0.2158
Trichomonas vaginalis geranylgeranyl transferase type I beta subunit, putative 0.058 0.0902 0.4115
Schistosoma mansoni thyroid hormone receptor 0.0147 0.0181 0.086
Schistosoma mansoni carbonic anhydrase II (carbonate dehydratase II) 0.0588 0.0915 0.4746
Trichomonas vaginalis geranylgeranyl transferase type II beta subunit, putative 0.058 0.0902 0.4115
Schistosoma mansoni 3-hydroxyacyl-CoA dehydrogenase 0.0066 0.0046 0.0145
Schistosoma mansoni microtubule-associated protein tau 0.0791 0.1252 0.6529
Toxoplasma gondii hypothetical protein 0.0307 0.0448 0.2079
Echinococcus granulosus carbonic anhydrase 0.0318 0.0466 0.2259
Loa Loa (eye worm) hypothetical protein 0.0157 0.0198 0.1041
Echinococcus granulosus Mitotic checkpoint protein PRCC C terminal 0.0125 0.0145 0.0532
Trichomonas vaginalis geranylgeranyl transferase type beta subunit, putative 0.058 0.0902 0.4115
Echinococcus multilocularis insulin receptor 0.0212 0.0289 0.1306
Echinococcus granulosus tumor protein p63 0.0336 0.0496 0.2417
Plasmodium vivax prenyltransferase alpha subunit, putative 0.1185 0.1907 1
Trypanosoma brucei protein farnesyltransferase beta subunit 0.058 0.0902 0.9816
Echinococcus granulosus protein farnesyltransferase alpha subunit 0.1185 0.1907 1
Echinococcus granulosus carbonic anhydrase 0.0318 0.0466 0.2259
Leishmania major geranylgeranyltransferase, putative 0.0157 0.0198 0.1755
Loa Loa (eye worm) hypothetical protein 0.0157 0.0198 0.1041
Echinococcus granulosus geranylgeranyl transferase type I beta subunit 0.0157 0.0198 0.0819
Brugia malayi Protein kinase domain containing protein 0.0212 0.0289 0.1515
Trichomonas vaginalis protein farnesyltransferase alpha subunit, putative 0.1185 0.1907 1
Entamoeba histolytica protein farnesyltransferase beta subunit, putative 0.058 0.0902 0.4115
Mycobacterium ulcerans imidazoleglycerol-phosphate dehydratase 0.6051 1 1
Plasmodium vivax conserved Plasmodium protein, unknown function 0.0423 0.064 0.2583
Echinococcus multilocularis Mitotic checkpoint protein PRCC, C terminal 0.0125 0.0145 0.0532
Onchocerca volvulus 0.0271 0.0388 0.8613
Brugia malayi Prenyltransferase and squalene oxidase repeat family protein 0.0157 0.0198 0.1041
Trypanosoma cruzi protein farnesyltransferase alpha subunit, putative 0.0307 0.0448 0.3477
Brugia malayi Furin-like cysteine rich region family protein 0.0663 0.1039 0.5449
Echinococcus multilocularis geranylgeranyl transferase type I beta subunit 0.0157 0.0198 0.0819
Leishmania major carbonic anhydrase-like protein 0.0588 0.0915 1
Giardia lamblia Rab geranylgeranyltransferase 0.0307 0.0448 0.1458
Onchocerca volvulus 0.0307 0.0448 1
Echinococcus granulosus epidermal growth factor receptor 0.0663 0.1039 0.5336
Loa Loa (eye worm) prenyltransferase and squalene oxidase repeat family protein 0.0157 0.0198 0.1041
Echinococcus multilocularis tumor protein p63 0.0336 0.0496 0.2417
Echinococcus granulosus geranylgeranyl transferase type 2 subunit alpha 0.0307 0.0448 0.2158
Echinococcus granulosus protein prenyltransferase alpha subunit 0.0307 0.0448 0.2158
Loa Loa (eye worm) TK/EGFR protein kinase 0.0663 0.1039 0.5449
Trypanosoma brucei hypothetical protein, conserved 0.0307 0.0448 0.3477
Echinococcus granulosus microtubule associated protein 2 0.0791 0.1252 0.6478
Schistosoma mansoni tyrosine kinase 0.0356 0.0529 0.2703
Mycobacterium tuberculosis Halimadienyl diphosphate synthase 0.0157 0.0198 0.0153
Loa Loa (eye worm) carbonic anhydrase 3 0.0588 0.0915 0.4797
Trichomonas vaginalis geranylgeranyl transferase type II beta subunit, putative 0.058 0.0902 0.4115
Echinococcus multilocularis Rab geranylgeranyltransferase, beta subunit 0.0157 0.0198 0.0819
Plasmodium falciparum protein farnesyltransferase subunit beta 0.058 0.0902 0.4115
Brugia malayi Protein prenyltransferase alpha subunit repeat containing protein 0.1185 0.1907 1
Schistosoma mansoni hypothetical protein 0.0318 0.0466 0.2371
Trichomonas vaginalis protein farnesyltransferase alpha subunit/RAB geranylgeranyl transferase alpha subunit, putative 0.1185 0.1907 1
Brugia malayi Carbonic anhydrase like protein 2 precursor 0.0318 0.0466 0.2445
Brugia malayi Pre-SET motif family protein 0.0238 0.0333 0.1747
Brugia malayi Eukaryotic-type carbonic anhydrase family protein 0.0318 0.0466 0.2445
Plasmodium vivax protein prenyltransferase alpha subunit, putative 0.0307 0.0448 0.1458
Schistosoma mansoni carbonic anhydrase II (carbonate dehydratase II) 0.0588 0.0915 0.4746
Trichomonas vaginalis protein farnesyltransferase alpha subunit, putative 0.1185 0.1907 1
Trypanosoma cruzi carbonic anhydrase-like protein, putative 0.0588 0.0915 1
Echinococcus multilocularis thyroid hormone receptor alpha 0.0147 0.0181 0.0726
Echinococcus granulosus epidermal growth factor receptor 0.0356 0.0529 0.2595
Schistosoma mansoni protein farnesyltransferase alpha subunit 0.1185 0.1907 1
Loa Loa (eye worm) eukaryotic-type carbonic anhydrase 0.0588 0.0915 0.4797
Schistosoma mansoni protein farnesyltransferase subunit beta 0.058 0.0902 0.4676
Schistosoma mansoni tyrosine kinase 0.0352 0.0523 0.267
Echinococcus multilocularis epidermal growth factor receptor 0.0356 0.0529 0.2595
Echinococcus multilocularis protein prenyltransferase alpha subunit 0.0307 0.0448 0.2158
Echinococcus multilocularis protein farnesyltransferase alpha subunit 0.1185 0.1907 1
Brugia malayi Putative carbonic anhydrase 5 precursor 0.0588 0.0915 0.4797
Plasmodium vivax farnesyltransferase beta subunit, putative 0.058 0.0902 0.4115
Schistosoma mansoni hypothetical protein 0.0125 0.0145 0.067
Trichomonas vaginalis geranylgeranyl transferase type II beta subunit, putative 0.058 0.0902 0.4115
Loa Loa (eye worm) 3-hydroxyacyl-CoA dehydrogenase type II 0.0061 0.0039 0.0203
Plasmodium falciparum carbonic anhydrase 0.0318 0.0466 0.1568
Trichomonas vaginalis protein farnesyltransferase alpha subunit, putative 0.0307 0.0448 0.1458
Trypanosoma cruzi Protein prenyltransferase alpha subunit repeat, putative 0.0307 0.0448 0.3477
Loa Loa (eye worm) TK/INSR protein kinase 0.0212 0.0289 0.1515
Echinococcus multilocularis carbonic anhydrase II 0.0588 0.0915 0.4668
Schistosoma mansoni tyrosine kinase 0.0352 0.0523 0.267
Echinococcus granulosus insulin receptor 0.0212 0.0289 0.1306
Trypanosoma cruzi hypothetical protein, conserved 0.0307 0.0448 0.3477
Plasmodium falciparum geranylgeranyl transferase type-2 subunit alpha, putative 0.0307 0.0448 0.1458
Trypanosoma brucei Protein prenyltransferase alpha subunit repeat, putative 0.0307 0.0448 0.3477
Echinococcus multilocularis carbonic anhydrase 0.0318 0.0466 0.2259
Trypanosoma cruzi carbonic anhydrase-like protein, putative 0.0588 0.0915 1
Echinococcus multilocularis carbonic anhydrase 0.0318 0.0466 0.2259
Loa Loa (eye worm) pre-SET domain-containing protein family protein 0.0238 0.0333 0.1747
Toxoplasma gondii prenyltransferase and squalene oxidase repeat-containing protein 0.058 0.0902 0.5871
Echinococcus multilocularis epidermal growth factor receptor 0.0663 0.1039 0.5336
Echinococcus multilocularis 0.0205 0.0278 0.1246
Schistosoma mansoni carbonic anhydrase-related 0.0318 0.0466 0.2371
Mycobacterium leprae Probable imidazole glycerol-phosphate dehydratase HisB 0.2984 0.49 0.5
Schistosoma mansoni tyrosine kinase 0.0212 0.0289 0.1432
Trypanosoma cruzi protein farnesyltransferase, putative 0.058 0.0902 0.9816
Trypanosoma brucei carbonic anhydrase-like protein 0.0588 0.0915 1
Plasmodium falciparum protein farnesyltransferase subunit alpha 0.1185 0.1907 1
Loa Loa (eye worm) eukaryotic-type carbonic anhydrase 0.0318 0.0466 0.2445
Loa Loa (eye worm) hypothetical protein 0.0318 0.0466 0.2445
Loa Loa (eye worm) hypothetical protein 0.0318 0.0466 0.2445
Echinococcus multilocularis insulin growth factor 1 receptor beta 0.0212 0.0289 0.1306
Echinococcus multilocularis protein farnesyltransferase subunit beta 0.058 0.0902 0.4598
Brugia malayi Carbonic anhydrase like protein 2 precursor 0.0318 0.0466 0.2445
Brugia malayi 3-hydroxyacyl-CoA dehydrogenase type II 0.0066 0.0046 0.0241
Giardia lamblia Rab geranylgeranyltransferase 0.1185 0.1907 1
Giardia lamblia Prenyltransferase 0.058 0.0902 0.4115
Schistosoma mansoni carbonic anhydrase 0.0318 0.0466 0.2371
Loa Loa (eye worm) prenyltransferase alpha subunit repeat containing protein 0.1185 0.1907 1
Schistosoma mansoni carbonic anhydrase-related 0.0318 0.0466 0.2371
Loa Loa (eye worm) prenyltransferase alpha subunit repeat containing protein 0.0307 0.0448 0.2347
Echinococcus granulosus insulin growth factor 1 receptor beta 0.0212 0.0289 0.1306
Entamoeba histolytica protein farnesyltransferase alpha subunit, putative 0.1185 0.1907 1
Schistosoma mansoni geranylgeranyl transferase type I beta subunit 0.0157 0.0198 0.0953
Leishmania major farnesyltransferase beta subunit 0.058 0.0902 0.9848
Leishmania major protein farnesyltransferase alpha subunit, putative 0.0307 0.0448 0.4622
Trichomonas vaginalis set domain proteins, putative 0.0271 0.0388 0.1109
Echinococcus multilocularis microtubule associated protein 2 0.0791 0.1252 0.6478
Entamoeba histolytica Rab geranylgeranyltransferase alpha subunit, putative 0.0307 0.0448 0.1458
Trichomonas vaginalis type I geranylgeranyltransferase beta subunit, putative 0.058 0.0902 0.4115
Loa Loa (eye worm) prenyltransferase and squalene oxidase repeat family protein 0.058 0.0902 0.4728
Brugia malayi Eukaryotic-type carbonic anhydrase family protein 0.0318 0.0466 0.2445
Echinococcus granulosus melanoma receptor tyrosine protein kinase 0.0356 0.0529 0.2595
Trypanosoma cruzi protein farnesyltransferase alpha subunit, putative 0.0307 0.0448 0.3477
Schistosoma mansoni geranylgeranyl transferase type I beta subunit 0.0157 0.0198 0.0953
Schistosoma mansoni tyrosine kinase 0.0212 0.0289 0.1432
Trypanosoma brucei protein farnesyltransferase alpha subunit, putative 0.0307 0.0448 0.3477
Trypanosoma cruzi hypothetical protein, conserved 0.0307 0.0448 0.3477
Schistosoma mansoni geranylgeranyl transferase type II beta subunit 0.0157 0.0198 0.0953

Activities

Activity type Activity value Assay description Source Reference
CC50 (functional) = 18 uM cytostatic concentration of the compound required to reduce the HEL cell number by 50%. after 5 days in the absence of virus ChEMBL. 11150169
CC50 (functional) = 18 uM Cytotoxic concentration required to inhibit Hel cell growth by using DMSO as solvent ChEMBL. 15993062
cLogP = 3.5 logarithm of the octanol-water partition coefficient for the compound ChEMBL. 11150169
EC50 (functional) = 0.0001 uM Evaluated for the anti-VZV activity , the concentration of compounds in microM required to reduce VZV TS plaque formation after 5 days in HEL cell cultures compared to untreated controls. ChEMBL. 11150169
EC50 (functional) = 0.0005 uM Evaluated for the anti-VZV activity , the concentration of compounds in microM required to reduce VZV OKA Plaque formation after 5 days in HEL cell cultures compared to untreated controls. ChEMBL. 11150169
EC50 (functional) > 5 uM Evaluated for the anti-VZV , the concentration of compounds in microM required to reduce VZVTK-07 ( thymidine kinase-deficient strain ) plaque formation after 5 days in HEL cell cultures compared to untreated controls. ChEMBL. 11150169
EC50 (functional) > 5 uM Evaluated for the anti-VZV , the concentration of compounds in microM required to reduce VZVTK-YS-R ( thymidine kinase-deficient strain ) plaque formation after 5 days in HEL cell cultures compared to untreated controls. ChEMBL. 11150169
MCC (functional) = 20 uM Minimal cytotoxic concentration, the concentration required to cause a microscopically visible alteration of normal cell morphology . ChEMBL. 11150169

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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