Detailed information for compound 406608

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 2018.82 | Formula: C96H48N8O40Zn++
  • H donors: 16 H acceptors: 36 LogP: 11.97 Rotable bonds: 32
    Rule of 5 violations (Lipinski): 4
  • SMILES: OC(=O)c1cc(cc(c1)C(=O)O)Oc1cc2c(cc1Oc1cc(cc(c1)C(=O)O)C(=O)O)C1=Nc3n4[Zn]56[N+]1=C2N=c1c2cc(Oc7cc(cc(c7)C(=O)O)C(=O)O)c(cc2c(=NC2=[N+]6C(=Nc4c4c3cc(Oc3cc(cc(c3)C(=O)O)C(=O)O)c(c4)Oc3cc(cc(c3)C(=O)O)C(=O)O)c3c2cc(c(c3)Oc2cc(cc(c2)C(=O)O)C(=O)O)Oc2cc(cc(c2)C(=O)O)C(=O)O)n51)Oc1cc(cc(c1)C(=O)O)C(=O)O
  • InChi: 1S/C96H50N8O40.Zn/c105-81(106)33-1-34(82(107)108)10-49(9-33)137-65-25-57-58(26-66(65)138-50-11-35(83(109)110)2-36(12-50)84(111)112)74-97-73(57)101-75-59-27-67(139-51-13-37(85(113)114)3-38(14-51)86(115)116)68(140-52-15-39(87(117)118)4-40(16-52)88(119)120)28-60(59)77(98-75)103-79-63-31-71(143-55-21-45(93(129)130)7-46(22-55)94(131)132)72(144-56-23-47(95(133)134)8-48(24-56)96(135)136)32-64(63)80(100-79)104-78-62-30-70(142-54-19-43(91(125)126)6-44(20-54)92(127)128)69(29-61(62)76(99-78)102-74)141-53-17-41(89(121)122)5-42(18-53)90(123)124;/h1-32H,(H18,97,98,99,100,101,102,103,104,105,106,107,108,109,110,111,112,113,114,115,116,117,118,119,120,121,122,123,124,125,126,127,128,129,130,131,132,133,134,135,136);/q;+4/p-2
  • InChiKey: NWUDCSJKJMIHPA-UHFFFAOYSA-L  

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

No curated genes were found associated with this compound

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Echinococcus multilocularis glyceraldehyde 3 phosphate dehydrogenase 0.0068 0.0666 0.0575
Loa Loa (eye worm) hypothetical protein 0.0044 0.0315 0.057
Mycobacterium tuberculosis Probable fructose-bisphosphate aldolase Fba 0.0143 0.179 1
Brugia malayi Thioredoxin reductase 0.0038 0.0216 0.0312
Mycobacterium tuberculosis Probable dehydrogenase 0.0086 0.0943 0.5267
Entamoeba histolytica fructose-1,6-bisphosphate aldolase, putative 0.0292 0.4033 1
Plasmodium vivax thioredoxin reductase, putative 0.0038 0.0216 0.21
Mycobacterium tuberculosis Probable reductase 0.0086 0.0943 0.5267
Loa Loa (eye worm) glyceraldehyde-3-phosphate dehydrogenase 0.0047 0.0351 0.0663
Trypanosoma brucei glyceraldehyde 3-phosphate dehydrogenase, glycosomal 0.0068 0.0666 1
Giardia lamblia Glyceraldehyde 3-phosphate dehydrogenase 0.0068 0.0666 0.0945
Schistosoma mansoni glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 0.0068 0.0666 0.0575
Plasmodium vivax glutathione reductase, putative 0.0038 0.0216 0.21
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0292 0.4033 1
Chlamydia trachomatis glyceraldehyde-3-phosphate dehydrogenase 0.0068 0.0666 0.5
Echinococcus granulosus histone lysine methyltransferase setb 0.003 0.0096 0.0017
Mycobacterium tuberculosis Putative ferredoxin reductase 0.0086 0.0943 0.5267
Mycobacterium tuberculosis NAD(P)H quinone reductase LpdA 0.0096 0.1087 0.6074
Loa Loa (eye worm) NNMT/PNMT/TEMT family protein 0.0286 0.3937 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0292 0.4033 1
Loa Loa (eye worm) hypothetical protein 0.0286 0.3937 1
Trypanosoma cruzi glyceraldehyde 3-phosphate dehydrogenase, cytosolic, putative 0.0068 0.0666 1
Echinococcus multilocularis glyceraldehyde 3 phosphate dehydrogenase 0.0044 0.0315 0.0221
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0292 0.4033 1
Schistosoma mansoni glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 0.0068 0.0666 0.0575
Schistosoma mansoni microtubule-associated protein tau 0.069 1 1
Trypanosoma cruzi glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0292 0.4033 1
Wolbachia endosymbiont of Brugia malayi glyceraldehyde-3-phosphate dehydrogenase, GapA 0.0068 0.0666 0.5
Loa Loa (eye worm) glyceraldehyde-3-phosphate dehydrogenase 0.0047 0.0351 0.0663
Trypanosoma cruzi glyceraldehyde 3-phosphate dehydrogenase, cytosolic, putative 0.0068 0.0666 1
Echinococcus multilocularis thioredoxin glutathione reductase 0.0038 0.0224 0.0128
Mycobacterium tuberculosis Probable nitrite reductase [NAD(P)H] large subunit [FAD flavoprotein] NirB 0.0086 0.0943 0.5267
Trypanosoma cruzi glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0292 0.4033 1
Mycobacterium leprae Probable fructose bisphosphate aldolase Fba 0.0143 0.179 1
Trypanosoma cruzi glyceraldehyde 3-phosphate dehydrogenase, cytosolic, putative 0.0068 0.0666 1
Brugia malayi NNMT/PNMT/TEMT family protein 0.0286 0.3937 1
Trypanosoma brucei glyceraldehyde-3-phosphate dehydrogenase, putative 0.0044 0.0315 0.2193
Loa Loa (eye worm) hypothetical protein 0.0286 0.3937 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0292 0.4033 1
Mycobacterium tuberculosis Dihydrolipoamide dehydrogenase LpdC (lipoamide reductase (NADH)) (lipoyl dehydrogenase) (dihydrolipoyl dehydrogenase) (diaphoras 0.0096 0.1087 0.6074
Trypanosoma cruzi glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 1
Trypanosoma cruzi glyceraldehyde-3-phosphate dehydrogenase, putative 0.0044 0.0315 0.2193
Trichomonas vaginalis glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 0.0944
Onchocerca volvulus 0.0237 0.3202 1
Toxoplasma gondii thioredoxin reductase 0.0038 0.0216 0.21
Leishmania major glyceraldehyde-3-phosphate dehydrogenase-like protein 0.0044 0.0315 0.2193
Trichomonas vaginalis glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 0.0944
Brugia malayi Pre-SET motif family protein 0.0208 0.277 0.6963
Loa Loa (eye worm) pre-SET domain-containing protein family protein 0.0208 0.277 0.6963
Mycobacterium leprae DIHYDROLIPOAMIDE DEHYDROGENASE LPD (LIPOAMIDE REDUCTASE (NADH)) (LIPOYL DEHYDROGENASE) (DIHYDROLIPOYL DEHYDROGENASE) (DIAPHORASE 0.0096 0.1087 0.6074
Echinococcus granulosus glyceraldehyde 3 phosphate dehydrogenase 0.0044 0.0315 0.0237
Loa Loa (eye worm) glutathione reductase 0.0038 0.0216 0.0312
Toxoplasma gondii glyceraldehyde-3-phosphate dehydrogenase GAPDH2 0.0068 0.0666 1
Trypanosoma cruzi glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 1
Trichomonas vaginalis glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 0.0944
Echinococcus multilocularis microtubule associated protein 2 0.069 1 1
Plasmodium vivax glyceraldehyde-3-phosphate dehydrogenase, putative 0.0068 0.0666 1
Trypanosoma brucei glyceraldehyde 3-phosphate dehydrogenase, glycosomal 0.0068 0.0666 1
Trichomonas vaginalis set domain proteins, putative 0.0237 0.3202 0.7765
Trichomonas vaginalis glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 0.0944
Toxoplasma gondii glyceraldehyde-3-phosphate dehydrogenase GAPDH1 0.0068 0.0666 1
Mycobacterium ulcerans fructose-bisphosphate aldolase 0.0143 0.179 1
Plasmodium falciparum glyceraldehyde-3-phosphate dehydrogenase 0.0068 0.0666 1
Treponema pallidum fructose-bisphosphate aldolase 0.0292 0.4033 1
Echinococcus granulosus glyceraldehyde 3 phosphate dehydrogenase 0.0068 0.0666 0.0591
Trichomonas vaginalis glyceraldehyde 3-phosphate dehydrogenase, putative 0.0068 0.0666 0.0944
Leishmania major glyceraldehyde 3-phosphate dehydrogenase, glycosomal 0.0068 0.0666 1
Schistosoma mansoni glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 0.0068 0.0666 0.0575
Trypanosoma brucei glyceraldehyde 3-phosphate dehydrogenase, cytosolic 0.0068 0.0666 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0292 0.4033 1
Echinococcus granulosus glyceraldehyde 3 phosphate dehydrogenase 0.0068 0.0666 0.0591
Loa Loa (eye worm) thioredoxin reductase 0.0038 0.0216 0.0312
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0292 0.4033 1
Mycobacterium tuberculosis Probable NADH dehydrogenase Ndh 0.0086 0.0943 0.5267
Brugia malayi Glyceraldehyde 3-phosphate dehydrogenase 0.0068 0.0666 0.1484
Entamoeba histolytica fructose-1,6-bisphosphate aldolase, putative 0.0292 0.4033 1
Brugia malayi glutathione reductase 0.0038 0.0216 0.0312
Echinococcus granulosus thioredoxin glutathione reductase 0.0038 0.0224 0.0145
Mycobacterium tuberculosis Probable oxidoreductase 0.0096 0.1087 0.6074
Giardia lamblia Fructose-bisphosphate aldolase 0.0292 0.4033 1
Loa Loa (eye worm) glyceraldehyde 3-phosphate dehydrogenase 0.0044 0.0315 0.057
Schistosoma mansoni glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 0.0068 0.0666 0.0575
Mycobacterium leprae PROBABLE NADH DEHYDROGENASE NDH 0.0086 0.0943 0.5267
Leishmania major glyceraldehyde 3-phosphate dehydrogenase, glycosomal 0.0068 0.0666 1
Loa Loa (eye worm) glyceraldehyde 3-phosphate dehydrogenase 0.0044 0.0315 0.057
Trypanosoma cruzi glyceraldehyde-3-phosphate dehydrogenase, putative 0.0044 0.0315 0.2193
Echinococcus multilocularis glyceraldehyde 3 phosphate dehydrogenase 0.0068 0.0666 0.0575
Mycobacterium tuberculosis NADPH-dependent mycothiol reductase Mtr 0.0038 0.0216 0.1206
Mycobacterium tuberculosis Probable membrane NADH dehydrogenase NdhA 0.0086 0.0943 0.5267

Activities

Activity type Activity value Assay description Source Reference
IC50 (functional) = 4.5 uM Inhibitory conentration of the compound was measured against hamster V79 cells; upon exposure to light (1 J/cm**2) ChEMBL. 15715471
IC50 (functional) = 4.5 uM Inhibitory conentration of the compound was measured against human HEp2 cells; upon exposure to light (1 J/cm**2) ChEMBL. 15715471
Viability (functional) = 80 % Percent of cell viabillity for the compound was measured in hamster V79 cells ChEMBL. 15715471
Viability (functional) = 80 % Percent of cell viabillity for the compound was measured in human HEp2 cells ChEMBL. 15715471

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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