pI: 6.453 |
Length (AA): 500 |
MW (Da): 54764 |
Paralog Number:
0
Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 0
Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable
Modbase 3D models:
There are 3 models calculated for this protein. More info on
these models, including the
models themselves is available at:
Modbase
Target Beg | Target End | Template | Template Beg | Template End | Identity | Evalue | Model Score | MPQS | zDope |
---|---|---|---|---|---|---|---|---|---|
5 | 60 | 2bay (A) | 1 | 56 | 46.00 | 0.000000000025 | 1 | 0.8389 | -1.76 |
156 | 495 | 3dm0 (A) | 287 | 1322 | 25.00 | 0 | 1 | 0.8693 | -0.07 |
189 | 496 | 4lg8 (A) | 195 | 503 | 55.00 | 0 | 1 | 1.3793 | -1.31 |
Help me make sense of these data.
A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.
PDB Structures:
Ortholog group members (OG5_128187)
Species | Accession | Gene Product |
---|---|---|
Arabidopsis thaliana | AT1G04510 | MOS4-associated complex 3A |
Arabidopsis thaliana | AT2G33340 | U-box protein MAC3B |
Babesia bovis | BBOV_IV006920 | WD domain, G-beta repeat containing protein |
Brugia malayi | Bm1_17445 | Hypothetical 55.2 kDa Trp-Asp repeats containing protein T10F2.4 inchromosome III |
Candida albicans | CaO19.6740 | similar to spliceosome component |
Candida albicans | CaO19.14032 | similar to spliceosome component |
Cryptosporidium hominis | Chro.60560 | guanine nucleotide-binding protein |
Cryptosporidium parvum | cgd6_4850 | PRP19 non-snRNP sliceosome component required for DNA repair |
Dictyostelium discoideum | DDB_G0276803 | WD40 repeat-containing protein |
Drosophila melanogaster | Dmel_CG5519 | CG5519 gene product from transcript CG5519-RA |
Echinococcus granulosus | EgrG_000116200 | pre mRNA processing factor 19 |
Echinococcus multilocularis | EmuJ_000116200 | pre mRNA processing factor 19 |
Homo sapiens | ENSG00000110107 | pre-mRNA processing factor 19 |
Leishmania braziliensis | LbrM.27.2690 | hypothetical protein, conserved,WD-repeat protein |
Leishmania donovani | LdBPK_272430.1 | hypothetical protein, conserved |
Leishmania infantum | LinJ.27.2430 | hypothetical protein, conserved,WD-repeat protein |
Leishmania major | LmjF.27.2480 | hypothetical protein, conserved,WD-repeat protein |
Leishmania mexicana | LmxM.27.2480 | hypothetical protein, conserved,WD-repeat protein |
Loa Loa (eye worm) | LOAG_04853 | nuclear matrix protein SNEV |
Mus musculus | ENSMUSG00000024735 | PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) |
Neospora caninum | NCLIV_010010 | HET-R, related |
Oryza sativa | 4348844 | Os10g0466300 |
Plasmodium berghei | PBANKA_0406800 | pre-mRNA-processing factor 19, putative |
Plasmodium falciparum | PF3D7_0308600 | pre-mRNA-processing factor 19, putative |
Plasmodium knowlesi | PKNH_0834100 | pre-mRNA-processing factor 19, putative |
Plasmodium vivax | PVX_119545 | pre-mRNA-processing factor 19, putative |
Plasmodium yoelii | PY02344 | hypothetical protein |
Saccharomyces cerevisiae | YLL036C | E3 ubiquitin-protein ligase PRP19 |
Schistosoma japonicum | Sjp_0205430 | ko:K10599 pre-mRNA-processing factor 19, putative |
Schistosoma mansoni | Smp_082980 | hypothetical protein |
Schmidtea mediterranea | mk4.005466.02 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003413.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.000020.25 | |
Schmidtea mediterranea | mk4.000076.19 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.023338.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.011483.02 | |
Schmidtea mediterranea | mk4.004071.02 | |
Schmidtea mediterranea | mk4.000694.04 | |
Schmidtea mediterranea | mk4.001279.04 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.011493.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.017916.01 | |
Schmidtea mediterranea | mk4.019245.00 | |
Schmidtea mediterranea | mk4.028367.00 | |
Schmidtea mediterranea | mk4.011172.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000116.02 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.007549.01 | |
Schmidtea mediterranea | mk4.004714.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.006266.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001271.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.014258.02 | |
Schmidtea mediterranea | mk4.009903.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003221.00 | |
Schmidtea mediterranea | mk4.000188.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.023373.01 | |
Schmidtea mediterranea | mk4.009297.03 | |
Schmidtea mediterranea | mk4.003350.00 | |
Schmidtea mediterranea | mk4.030826.01 | |
Schmidtea mediterranea | mk4.000694.00 | |
Schmidtea mediterranea | mk4.000253.04 | |
Schmidtea mediterranea | mk4.003618.05 | |
Schmidtea mediterranea | mk4.003555.00 | |
Schmidtea mediterranea | mk4.014676.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.001160.07 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.023296.00 | |
Schmidtea mediterranea | mk4.024695.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.029700.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.000142.11 | |
Schmidtea mediterranea | mk4.014575.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003287.00 | |
Schmidtea mediterranea | mk4.022196.00 | |
Schmidtea mediterranea | mk4.026871.00 | |
Schmidtea mediterranea | mk4.002165.00 | |
Schmidtea mediterranea | mk4.000466.00 | |
Schmidtea mediterranea | mk4.005371.02 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000007.02 | |
Schmidtea mediterranea | mk4.011669.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.002963.03 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.009894.00 | |
Schmidtea mediterranea | mk4.018589.01 | |
Schmidtea mediterranea | mk4.014615.01 | |
Schmidtea mediterranea | mk4.000639.00 | |
Schmidtea mediterranea | mk4.008266.01 | |
Schmidtea mediterranea | mk4.000172.06 | |
Schmidtea mediterranea | mk4.011096.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000295.02 | |
Schmidtea mediterranea | mk4.003125.07 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.029696.00 | |
Schmidtea mediterranea | mk4.008277.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.005158.03 | |
Schmidtea mediterranea | mk4.012492.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.010146.00 | |
Schmidtea mediterranea | mk4.020146.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.013503.02 | |
Schmidtea mediterranea | mk4.011811.03 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.018206.00 | |
Schmidtea mediterranea | mk4.002638.01 | |
Schmidtea mediterranea | mk4.002024.00 | |
Schmidtea mediterranea | mk4.031799.01 | |
Schmidtea mediterranea | mk4.012466.01 | |
Schmidtea mediterranea | mk4.016627.02 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003974.03 | |
Schmidtea mediterranea | mk4.005532.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003850.05 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.010195.00 | |
Schmidtea mediterranea | mk4.002247.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003780.04 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000940.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.000208.03 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.001394.01 | |
Schmidtea mediterranea | mk4.007754.01 | |
Schmidtea mediterranea | mk4.000985.21 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.006928.00 | |
Schmidtea mediterranea | mk4.008947.03 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.012426.00 | |
Schmidtea mediterranea | mk4.012981.01 | |
Schmidtea mediterranea | mk4.007723.00 | |
Schmidtea mediterranea | mk4.001699.00 | |
Schmidtea mediterranea | mk4.010414.00 | |
Schmidtea mediterranea | mk4.014529.00 | |
Schmidtea mediterranea | mk4.046866.00 | |
Schmidtea mediterranea | mk4.015924.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.008290.00 | |
Schmidtea mediterranea | mk4.002944.04 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.015840.00 | |
Schmidtea mediterranea | mk4.056543.00 | |
Schmidtea mediterranea | mk4.003124.00 | |
Schmidtea mediterranea | mk4.009702.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.016057.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.022939.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.000569.01 | |
Schmidtea mediterranea | mk4.004326.03 | |
Schmidtea mediterranea | mk4.005478.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.006367.01 | |
Schmidtea mediterranea | mk4.020311.02 | |
Schmidtea mediterranea | mk4.004577.00 | |
Schmidtea mediterranea | mk4.008022.01 | |
Schmidtea mediterranea | mk4.007211.00 | |
Schmidtea mediterranea | mk4.002730.00 | |
Schmidtea mediterranea | mk4.006834.02 | |
Schmidtea mediterranea | mk4.009394.01 | |
Schmidtea mediterranea | mk4.000584.02 | |
Schmidtea mediterranea | mk4.000671.14 | |
Schmidtea mediterranea | mk4.004950.00 | |
Schmidtea mediterranea | mk4.003785.01 | |
Schmidtea mediterranea | mk4.000092.18 | |
Schmidtea mediterranea | mk4.019007.00 | |
Schmidtea mediterranea | mk4.015938.00 | |
Schmidtea mediterranea | mk4.018246.01 | |
Schmidtea mediterranea | mk4.021417.04 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.014050.01 | |
Schmidtea mediterranea | mk4.011422.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001010.02 | |
Schmidtea mediterranea | mk4.000742.08 | |
Schmidtea mediterranea | mk4.007847.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000932.12 | |
Schmidtea mediterranea | mk4.013963.00 | |
Schmidtea mediterranea | mk4.022457.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.011519.01 | |
Schmidtea mediterranea | mk4.003244.05 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.007552.00 | |
Schmidtea mediterranea | mk4.027504.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.021778.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.005650.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.005043.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.001332.05 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000290.16 | |
Schmidtea mediterranea | mk4.000531.10 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.002663.00 | |
Schmidtea mediterranea | mk4.004338.01 | |
Schmidtea mediterranea | mk4.018915.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.024263.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.023460.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.024507.01 | |
Schmidtea mediterranea | mk4.018776.01 | |
Schmidtea mediterranea | mk4.010592.02 | |
Schmidtea mediterranea | mk4.017173.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.004615.02 | |
Schmidtea mediterranea | mk4.000531.11 | |
Schmidtea mediterranea | mk4.000288.15 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.000661.07 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001697.01 | |
Schmidtea mediterranea | mk4.002646.07 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001765.00 | |
Schmidtea mediterranea | mk4.005717.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.023958.03 | |
Schmidtea mediterranea | mk4.000118.08 | |
Schmidtea mediterranea | mk4.015214.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.002574.00 | |
Schmidtea mediterranea | mk4.009464.00 | |
Schmidtea mediterranea | mk4.001118.04 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.002126.01 | |
Schmidtea mediterranea | mk4.002268.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001606.05 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.009324.00 | |
Schmidtea mediterranea | mk4.003227.03 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.002017.00 | |
Schmidtea mediterranea | mk4.013813.01 | |
Schmidtea mediterranea | mk4.000311.09 | |
Schmidtea mediterranea | mk4.000042.03 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.005925.00 | |
Schmidtea mediterranea | mk4.027536.00 | |
Schmidtea mediterranea | mk4.008894.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.006556.01 | |
Schmidtea mediterranea | mk4.000289.02 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.017197.01 | |
Schmidtea mediterranea | mk4.011984.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.008891.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.015297.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.016435.00 | |
Schmidtea mediterranea | mk4.014960.00 | |
Schmidtea mediterranea | mk4.003666.04 | |
Schmidtea mediterranea | mk4.003267.00 | |
Schmidtea mediterranea | mk4.011680.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.005254.05 | |
Schmidtea mediterranea | mk4.009825.00 | |
Schmidtea mediterranea | mk4.000693.02 | |
Schmidtea mediterranea | mk4.010272.00 | |
Schmidtea mediterranea | mk4.007303.02 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.007725.03 | |
Schmidtea mediterranea | mk4.007630.02 | |
Schmidtea mediterranea | mk4.008561.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.008620.00 | |
Schmidtea mediterranea | mk4.000717.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003227.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.008113.10 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.001206.03 | |
Schmidtea mediterranea | mk4.041067.00 | |
Schmidtea mediterranea | mk4.016428.01 | |
Schmidtea mediterranea | mk4.013365.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003460.01 | |
Schmidtea mediterranea | mk4.006777.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.010516.00 | |
Schmidtea mediterranea | mk4.008197.03 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.004566.00 | |
Schmidtea mediterranea | mk4.001822.08 | |
Schmidtea mediterranea | mk4.019240.02 | |
Schmidtea mediterranea | mk4.020092.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.002389.04 | |
Schmidtea mediterranea | mk4.026297.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.006174.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.004141.02 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.011183.02 | |
Schmidtea mediterranea | mk4.001296.10 | |
Schmidtea mediterranea | mk4.000589.01 | |
Schmidtea mediterranea | mk4.030483.00 | |
Schmidtea mediterranea | mk4.017464.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.000007.01 | |
Schmidtea mediterranea | mk4.015253.00 | |
Schmidtea mediterranea | mk4.009992.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.002801.03 | |
Schmidtea mediterranea | mk4.007604.01 | |
Schmidtea mediterranea | mk4.015098.00 | |
Schmidtea mediterranea | mk4.000027.08 | |
Schmidtea mediterranea | mk4.004259.02 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.002687.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.016229.00 | |
Schmidtea mediterranea | mk4.030378.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000149.04 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.001747.04 | |
Schmidtea mediterranea | mk4.000386.20 | |
Schmidtea mediterranea | mk4.014880.03 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.027754.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000013.17 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.013351.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.019477.00 | |
Schmidtea mediterranea | mk4.026604.01 | |
Schmidtea mediterranea | mk4.005826.02 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.018559.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.003177.05 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.002960.03 | |
Schmidtea mediterranea | mk4.001337.07 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.012652.00 | |
Schmidtea mediterranea | mk4.000078.13 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.035630.00 | |
Schmidtea mediterranea | mk4.011870.03 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001461.06 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.012235.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.008171.01 | |
Schmidtea mediterranea | mk4.002343.02 | |
Schmidtea mediterranea | mk4.001832.05 | |
Schmidtea mediterranea | mk4.004121.01 | |
Schmidtea mediterranea | mk4.005403.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.000748.02 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000630.07 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001974.05 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.009980.02 | |
Schmidtea mediterranea | mk4.003228.00 | |
Schmidtea mediterranea | mk4.018563.00 | |
Schmidtea mediterranea | mk4.013672.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.003426.00 | |
Schmidtea mediterranea | mk4.000370.04 | |
Schmidtea mediterranea | mk4.006604.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.002042.01 | |
Schmidtea mediterranea | mk4.019118.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.003802.04 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.000678.02 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.010913.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.002458.00 | |
Schmidtea mediterranea | mk4.000555.09 | |
Schmidtea mediterranea | mk4.006483.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.019214.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.010373.00 | |
Schmidtea mediterranea | mk4.001121.05 | |
Schmidtea mediterranea | mk4.001465.04 | |
Schmidtea mediterranea | mk4.000100.29 | |
Schmidtea mediterranea | mk4.008970.00 | |
Schmidtea mediterranea | mk4.005923.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001853.00 | |
Schmidtea mediterranea | mk4.028877.00 | |
Schmidtea mediterranea | mk4.004608.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001959.04 | |
Schmidtea mediterranea | mk4.006725.02 | |
Schmidtea mediterranea | mk4.004386.02 | |
Schmidtea mediterranea | mk4.000101.03 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.003029.01 | |
Schmidtea mediterranea | mk4.031349.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.001474.02 | |
Schmidtea mediterranea | mk4.011788.01 | |
Schmidtea mediterranea | mk4.047563.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.017249.00 | |
Schmidtea mediterranea | mk4.001598.02 | |
Schmidtea mediterranea | mk4.009483.08 | |
Schmidtea mediterranea | mk4.016038.00 | |
Schmidtea mediterranea | mk4.008420.02 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.001768.01 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.005577.01 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.004479.02 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.019926.00 | |
Schmidtea mediterranea | mk4.022714.00 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.001219.08 | |
Schmidtea mediterranea | mk4.025174.00 | |
Schmidtea mediterranea | mk4.024040.00 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.027612.00 | |
Schmidtea mediterranea | mk4.004020.02 | |
Schmidtea mediterranea | mk4.026631.00 | |
Schmidtea mediterranea | mk4.004837.01 | |
Schmidtea mediterranea | mk4.000718.05 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.001625.07 | |
Schmidtea mediterranea | mk4.002836.03 | Pre-mRNA-processing factor 19 |
Schmidtea mediterranea | mk4.016538.00 | |
Schmidtea mediterranea | mk4.005181.02 | Pre-mRNA-processing factor 19 homolog |
Schmidtea mediterranea | mk4.007777.00 | |
Schmidtea mediterranea | mk4.009912.00 | |
Schmidtea mediterranea | mk4.015473.01 | |
Schmidtea mediterranea | mk4.003570.00 | |
Schmidtea mediterranea | mk4.024150.02 | |
Trypanosoma brucei gambiense | Tbg.972.2.3270 | hypothetical protein, conserved |
Trypanosoma brucei | Tb927.2.5240 | pre-mRNA splicing factor 19 |
Trypanosoma congolense | TcIL3000_2_1350 | hypothetical protein, conserved |
Trypanosoma cruzi | TcCLB.507801.60 | pre-mRNA splicing factor 19, putative |
Trypanosoma cruzi | TcCLB.509103.10 | pre-mRNA splicing factor 19, putative |
Toxoplasma gondii | TGME49_320210 | WD domain, G-beta repeat domain containing protein |
Theileria parva | TP03_0215 | guanine nucleotide-binding protein, putative |
Trichomonas vaginalis | TVAG_325830 | WD-repeat protein, putative |
Trichomonas vaginalis | TVAG_412620 | WD-repeat protein, putative |
Gene/Ortholog | Organism | Phenotype | Source Study |
---|---|---|---|
Tb927.2.5240 | Trypanosoma brucei | significant loss of fitness in bloodstream forms (3 days) | alsford |
Tb927.2.5240 | Trypanosoma brucei | significant loss of fitness in bloodstream forms (6 days) | alsford |
Tb927.2.5240 | Trypanosoma brucei | significant loss of fitness in procyclic forms | alsford |
Tb927.2.5240 | Trypanosoma brucei | significant loss of fitness in differentiation of procyclic to bloodstream forms | alsford |
YLL036C | Saccharomyces cerevisiae | inviable | yeastgenome |
PBANKA_0406800 | Plasmodium berghei | Essential | plasmo |
TGME49_320210 | Toxoplasma gondii | Probably essential | sidik |
neb | C. elegans RNAi phenotypes | Data obtained from Wormbase WS150, curated by K. Chaudary and T. Carlow, New England Biolabs |
alsford | High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome | Genome Res 2011, 21:915-924 |
gerdes | Experimental determination and system-level analysis of essential genes in E. coli MG1655 | Gerdes et al., J Bacteriol. 2003 185:5673-84 |
nmpdr | Genome-scale essentiality datasets from published studies (M. tuberculosis) | National Microbial Pathogen Data Resource |
wormbase | C. elegans RNAi experiments | WormBase web site, http://www.wormbase.org, release WS170 |
keio | Systematic single-gene knock-out mutants of E. coli K12 | The Keio Collection |
yeastgenome | Systematic deletion of yeast genes | Saccharomyces Genome Database |
shigen | Profiling of E. coli Chromosome (PEC) | National Institute of Genetics, Japan |
blattner | Systematic mutagenesis of the E. coli (MG1655) genome | J Bacteriol 2004, 186:4921-4930 |
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
In any case, if you have information about papers containing relevant validation data for this target, please contact us.
1 literature reference was collected for this gene.