Detailed information for compound 1986951

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 470.576 | Formula: C27H35FN2O4
  • H donors: 0 H acceptors: 1 LogP: 4.32 Rotable bonds: 9
    Rule of 5 violations (Lipinski): 1
  • SMILES: COc1ccccc1CN1CC[C@H](C1)C(=O)N(Cc1cc(F)c2c(c1)OCCCO2)CC(C)C
  • InChi: 1S/C27H35FN2O4/c1-19(2)15-30(16-20-13-23(28)26-25(14-20)33-11-6-12-34-26)27(31)22-9-10-29(18-22)17-21-7-4-5-8-24(21)32-3/h4-5,7-8,13-14,19,22H,6,9-12,15-18H2,1-3H3/t22-/m1/s1
  • InChiKey: LWIUAAFMSATBNR-JOCHJYFZSA-N  


Substructure search Similarity search

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Cricetulus griseus Prokineticin receptor 2 Starlite/ChEMBL No references
Cricetulus griseus Prokineticin receptor 1 No references

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Schistosoma japonicum ko:K04209 neuropeptide Y receptor, invertebrate, putative Prokineticin receptor 2   391 aa 329 aa 28.9 %
Echinococcus multilocularis neuropeptide receptor Prokineticin receptor 2   391 aa 357 aa 24.6 %
Schistosoma mansoni peptide (allatostatin)-like receptor Prokineticin receptor 2   391 aa 375 aa 24.0 %
Echinococcus granulosus allatostatin A receptor Prokineticin receptor 2   391 aa 372 aa 23.1 %
Onchocerca volvulus Prokineticin receptor 2   391 aa 321 aa 27.7 %
Echinococcus multilocularis allatostatin A receptor Prokineticin receptor 2   391 aa 340 aa 22.9 %
Echinococcus multilocularis thyrotropin releasing hormone receptor Prokineticin receptor 2   391 aa 379 aa 21.6 %
Schistosoma japonicum ko:K04135 adrenergic receptor, alpha 1a, putative Prokineticin receptor 2   391 aa 376 aa 22.6 %
Echinococcus granulosus thyrotropin releasing hormone receptor Prokineticin receptor 2   391 aa 379 aa 22.2 %
Echinococcus granulosus neuropeptide receptor Prokineticin receptor 2   391 aa 322 aa 31.1 %
Schistosoma japonicum ko:K04134 cholinergic receptor, invertebrate, putative Prokineticin receptor 2   391 aa 406 aa 21.9 %
Onchocerca volvulus Prokineticin receptor 2   391 aa 330 aa 20.9 %
Echinococcus multilocularis neuropeptide receptor Prokineticin receptor 2   391 aa 329 aa 30.1 %
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Loa Loa (eye worm) hypothetical protein 0.0312 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.0312 0.5 0.5
Loa Loa (eye worm) NNMT/PNMT/TEMT family protein 0.0312 0.5 0.5

Activities

Activity type Activity value Assay description Source Reference
Ki (binding) = 0.81 nM BindingDB_Patents: Calcium Mobilization Assay. An aequorin-based luminescent assay for calcium mobilization was used to measure mobilization of intracellular Ca2+ (Bullock et al., Mol Pharmacol 65, 582-588, 2004). Chinese hamster ovary (CHO) cells stably expressing photoprotein aequorin and recombinant PKR1 or PKR2 were tested by this method. Briefly, the cells were charged in Opti-MEM (Invitrogen) containing 8 µM of coelenterazine cp at 37° C. for 2 hours. Cells were detached by brief typsinization and maintained in Hank's Balanced Salt Solution (HBSS) plus 10 mM HEPES (pH7.5) and 0.1% BSA at about 5×105 cells/ml. Luminescence measurements were made using a Berthold luminometer. ChEMBL. No reference
Ki (binding) = 1.7 nM BindingDB_Patents: Calcium Mobilization Assay. An aequorin-based luminescent assay for calcium mobilization was used to measure mobilization of intracellular Ca2+ (Bullock et al., Mol Pharmacol 65, 582-588, 2004). Chinese hamster ovary (CHO) cells stably expressing photoprotein aequorin and recombinant PKR1 or PKR2 were tested by this method. Briefly, the cells were charged in Opti-MEM (Invitrogen) containing 8 µM of coelenterazine cp at 37° C. for 2 hours. Cells were detached by brief typsinization and maintained in Hank's Balanced Salt Solution (HBSS) plus 10 mM HEPES (pH7.5) and 0.1% BSA at about 5×105 cells/ml. Luminescence measurements were made using a Berthold luminometer. ChEMBL. No reference
Ki (binding) = 10.4 nM BindingDB_Patents: Calcium Mobilization Assay. An aequorin-based luminescent assay for calcium mobilization was used to measure mobilization of intracellular Ca2+ (Bullock et al., Mol Pharmacol 65, 582-588, 2004). Chinese hamster ovary (CHO) cells stably expressing photoprotein aequorin and recombinant PKR1 or PKR2 were tested by this method. Briefly, the cells were charged in Opti-MEM (Invitrogen) containing 8 uM of coelenterazine cp at 37degrees C. for 2 hours. Cells were detached by brief typsinization and maintained in Hank's Balanced Salt Solution (HBSS) plus 10 mM HEPES (pH7.5) and 0.1% BSA at about 5x105 cells/ml. Luminescence measurements were made using a Berthold luminometer. ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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