Detailed information for compound 291251

Basic information

Technical information
  • TDR Targets ID: 291251
  • Name: N-(2-methylpropyl)-2-(2-phenyl-1H-indol-3-yl) -N-(pyridin-3-ylmethyl)acetamide
  • MW: 397.512 | Formula: C26H27N3O
  • H donors: 1 H acceptors: 2 LogP: 4.86 Rotable bonds: 8
    Rule of 5 violations (Lipinski): 1
  • SMILES: CC(CN(C(=O)Cc1c([nH]c2c1cccc2)c1ccccc1)Cc1cccnc1)C
  • InChi: 1S/C26H27N3O/c1-19(2)17-29(18-20-9-8-14-27-16-20)25(30)15-23-22-12-6-7-13-24(22)28-26(23)21-10-4-3-5-11-21/h3-14,16,19,28H,15,17-18H2,1-2H3
  • InChiKey: ZSJFKEDOWSQVRC-UHFFFAOYSA-N  


Substructure search Similarity search

Network

Hover on a compound node to display the structore

Synonyms

  • N-isobutyl-2-(2-phenyl-1H-indol-3-yl)-N-(3-pyridylmethyl)acetamide
  • N-(2-methylpropyl)-2-(2-phenyl-1H-indol-3-yl)-N-(pyridin-3-ylmethyl)ethanamide

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens farnesyltransferase, CAAX box, alpha Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Plasmodium berghei protein farnesyltransferase subunit alpha, putative Get druggable targets OG5_128459 All targets in OG5_128459
Candida albicans alpha subunit shared by C terminal CaaX Geranylgeranyltransferase I (Ram2p+Cdc43p) and farnesyltransferase (Ram2p+Ram1p) Get druggable targets OG5_128459 All targets in OG5_128459
Plasmodium falciparum protein farnesyltransferase subunit alpha Get druggable targets OG5_128459 All targets in OG5_128459
Plasmodium vivax prenyltransferase alpha subunit, putative Get druggable targets OG5_128459 All targets in OG5_128459
Brugia malayi Protein prenyltransferase alpha subunit repeat containing protein Get druggable targets OG5_128459 All targets in OG5_128459
Echinococcus granulosus protein farnesyltransferase alpha subunit Get druggable targets OG5_128459 All targets in OG5_128459
Cryptosporidium parvum farnesyltransferase Get druggable targets OG5_128459 All targets in OG5_128459
Schistosoma japonicum ko:K05954 farnesyltransferase, CAAX box, alpha [EC:2.5.1.58 2.5.1.59], putative Get druggable targets OG5_128459 All targets in OG5_128459
Trichomonas vaginalis protein farnesyltransferase alpha subunit, putative Get druggable targets OG5_128459 All targets in OG5_128459
Entamoeba histolytica protein farnesyltransferase alpha subunit, putative Get druggable targets OG5_128459 All targets in OG5_128459
Schistosoma mansoni protein farnesyltransferase alpha subunit Get druggable targets OG5_128459 All targets in OG5_128459
Trichomonas vaginalis protein farnesyltransferase alpha subunit/RAB geranylgeranyl transferase alpha subunit, putative Get druggable targets OG5_128459 All targets in OG5_128459
Trichomonas vaginalis protein farnesyltransferase alpha subunit, putative Get druggable targets OG5_128459 All targets in OG5_128459
Neospora caninum hypothetical protein Get druggable targets OG5_128459 All targets in OG5_128459
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_128459 All targets in OG5_128459
Babesia bovis protein prenyltransferase alpha subunit repeat domain containing protein Get druggable targets OG5_128459 All targets in OG5_128459
Candida albicans alpha subunit shared by C terminal CaaX Geranylgeranyltransferase I (Ram2p+Cdc43p) and farnesyltransferase (Ram2p+Ram1p) Get druggable targets OG5_128459 All targets in OG5_128459
Echinococcus multilocularis protein farnesyltransferase alpha subunit Get druggable targets OG5_128459 All targets in OG5_128459
Giardia lamblia Rab geranylgeranyltransferase Get druggable targets OG5_128459 All targets in OG5_128459
Cryptosporidium hominis farnesyltransferase Get druggable targets OG5_128459 All targets in OG5_128459
Trichomonas vaginalis protein farnesyltransferase alpha subunit/RAB geranylgeranyl transferase alpha subunit, putative Get druggable targets OG5_128459 All targets in OG5_128459
Theileria parva hypothetical protein Get druggable targets OG5_128459 All targets in OG5_128459
Loa Loa (eye worm) prenyltransferase alpha subunit repeat containing protein Get druggable targets OG5_128459 All targets in OG5_128459
Toxoplasma gondii hypothetical protein Get druggable targets OG5_128459 All targets in OG5_128459
Plasmodium knowlesi protein farnesyltransferase subunit alpha, putative Get druggable targets OG5_128459 All targets in OG5_128459
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Brugia malayi Steroid receptor seven-up type 2 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-14 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-19 0.18 0.5 0.5
Schistosoma mansoni FTZ-F1 nuclear receptor-like protein 0.18 0.5 0.5
Schistosoma mansoni nuclear hormone receptor 0.18 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.18 0.5 0.5
Echinococcus granulosus nuclear receptor 2DBD gamma 0.18 0.5 0.5
Schistosoma mansoni photoreceptor-specific nuclear receptor related 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor-like 1 0.18 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.18 0.5 0.5
Echinococcus multilocularis ecdysone induced protein 78C 0.18 0.5 0.5
Onchocerca volvulus Steroid hormone receptor family member cnr14 homolog 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-19 0.18 0.5 0.5
Loa Loa (eye worm) nuclear hormone receptor family member nhr-40 0.18 0.5 0.5
Schistosoma mansoni nuclear hormone receptor nor-1/nor-2 0.18 0.5 0.5
Echinococcus multilocularis thyroid hormone receptor alpha 0.18 0.5 0.5
Loa Loa (eye worm) nuclear hormone receptor family member nhr-14 0.18 0.5 0.5
Echinococcus granulosus Nuclear hormone receptor family member nhr 41 0.18 0.5 0.5
Echinococcus granulosus FTZ F1 alpha 0.18 0.5 0.5
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.18 0.5 0.5
Brugia malayi nuclear receptor NHR-88 0.18 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.18 0.5 0.5
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.18 0.5 0.5
Echinococcus multilocularis FTZ F1 alpha 0.18 0.5 0.5
Loa Loa (eye worm) nuclear hormone receptor family member nhr-41 0.18 0.5 0.5
Echinococcus granulosus nuclear receptor 2DBD gamma 0.18 0.5 0.5
Brugia malayi steroid hormone receptor 0.18 0.5 0.5
Brugia malayi nuclear hormone receptor 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-40 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-1 0.18 0.5 0.5
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.18 0.5 0.5
Echinococcus granulosus ecdysone induced protein 78C 0.18 0.5 0.5
Loa Loa (eye worm) nuclear Hormone Receptor family member 0.18 0.5 0.5
Schistosoma mansoni nuclear receptor 2DBD-gamma 0.18 0.5 0.5
Loa Loa (eye worm) nuclear hormone receptor family member nhr-49 0.18 0.5 0.5
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.18 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.18 0.5 0.5
Schistosoma mansoni Tr4/Tr2 (homologue) 0.18 0.5 0.5
Schistosoma mansoni RAR-like nuclear receptor 0.18 0.5 0.5
Schistosoma mansoni thyroid hormone receptor 0.18 0.5 0.5
Loa Loa (eye worm) steroid hormone receptor 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-25 0.18 0.5 0.5
Echinococcus granulosus FTZ F1 nuclear receptor protein 0.18 0.5 0.5
Echinococcus granulosus COUP TF:Svp nuclear hormone receptor 0.18 0.5 0.5
Brugia malayi photoreceptor-specific nuclear receptor 0.18 0.5 0.5
Schistosoma mansoni coup transcription factor 0.18 0.5 0.5
Schistosoma mansoni retinoid-x-receptor (RXR) 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-49 0.18 0.5 0.5
Schistosoma mansoni steroid hormone receptor ad4bp 0.18 0.5 0.5
Loa Loa (eye worm) nuclear hormone receptor family member nhr-31 0.18 0.5 0.5
Echinococcus granulosus hepatocyte nuclear factor 4 alpha 0.18 0.5 0.5
Onchocerca volvulus 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-3 0.18 0.5 0.5
Onchocerca volvulus Bile acid receptor homolog 0.18 0.5 0.5
Echinococcus multilocularis hepatocyte nuclear factor 4 alpha 0.18 0.5 0.5
Echinococcus multilocularis Nuclear hormone receptor family member nhr 41 0.18 0.5 0.5
Echinococcus multilocularis COUP TF:Svp nuclear hormone receptor 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-31 0.18 0.5 0.5
Schistosoma mansoni retinoic acid receptor RXR 0.18 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.18 0.5 0.5
Echinococcus multilocularis FTZ F1 nuclear receptor protein 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-25 0.18 0.5 0.5
Onchocerca volvulus Protein ultraspiracle homolog 0.18 0.5 0.5
Schistosoma mansoni thyroid hormone receptor 0.18 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.18 0.5 0.5
Loa Loa (eye worm) nuclear hormone receptor family member nhr-1 0.18 0.5 0.5
Echinococcus granulosus retinoic acid receptor rxr beta a 0.18 0.5 0.5
Brugia malayi Nuclear hormone receptor family member nhr-41 0.18 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.18 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.18 0.5 0.5

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) = 2484 nM Concentration required for the inhibitory activity against human Farnesyltransferase ChEMBL. 11294379
IC50 (binding) = 2484 nM Concentration required for the inhibitory activity against human Farnesyltransferase ChEMBL. 11294379

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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