Detailed information for compound 336545

Basic information

Technical information
  • TDR Targets ID: 336545
  • Name: (3S)-3-amino-N-benzyl-4-[(2S)-2-cyanopyrrolid in-1-yl]-4-oxobutanamide
  • MW: 300.356 | Formula: C16H20N4O2
  • H donors: 2 H acceptors: 3 LogP: -0.1 Rotable bonds: 7
    Rule of 5 violations (Lipinski): 1
  • SMILES: N#C[C@@H]1CCCN1C(=O)[C@H](CC(=O)NCc1ccccc1)N
  • InChi: 1S/C16H20N4O2/c17-10-13-7-4-8-20(13)16(22)14(18)9-15(21)19-11-12-5-2-1-3-6-12/h1-3,5-6,13-14H,4,7-9,11,18H2,(H,19,21)/t13-,14-/m0/s1
  • InChiKey: GGFAOTAJDWCMLQ-KBPBESRZSA-N  

Network

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Synonyms

  • (3S)-3-amino-N-benzyl-4-[(2S)-2-cyanopyrrolidin-1-yl]-4-oxo-butanamide
  • (3S)-3-amino-N-benzyl-4-[(2S)-2-cyano-1-pyrrolidinyl]-4-oxobutanamide
  • (3S)-3-azanyl-4-[(2S)-2-cyanopyrrolidin-1-yl]-4-oxo-N-(phenylmethyl)butanamide
  • (3S)-3-amino-N-benzyl-4-[(2S)-2-cyanopyrrolidino]-4-keto-butyramide
  • (3S)-3-amino-4-[(2S)-2-cyanopyrrolidin-1-yl]-4-oxo-N-(phenylmethyl)butanamide
  • (3S)-3-amino-4-[(2S)-2-cyano-1-pyrrolidinyl]-4-oxo-N-(phenylmethyl)butanamide
  • (3S)-3-amino-N-(benzyl)-4-[(2S)-2-cyanopyrrolidin-1-yl]-4-keto-butyramide

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens dipeptidyl-peptidase 8 Starlite/ChEMBL References
Homo sapiens dipeptidyl-peptidase 4 Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Echinococcus multilocularis dipeptidyl aminopeptidaseprotein Get druggable targets OG5_128614 All targets in OG5_128614
Echinococcus multilocularis Dipeptidyl peptidase 9 Get druggable targets OG5_129743 All targets in OG5_129743
Trypanosoma cruzi serine peptidase, Clan SC, Family S9B Get druggable targets OG5_129743 All targets in OG5_129743
Schistosoma mansoni dipeptidyl-peptidase 9 (S09 family) Get druggable targets OG5_129743 All targets in OG5_129743
Leishmania mexicana dipeptidyl-peptidase 8-like serine peptidase, putative,serine peptidase, Clan SC, Family S9B Get druggable targets OG5_129743 All targets in OG5_129743
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_129743 All targets in OG5_129743
Trypanosoma brucei Dipeptidyl-peptidase 8-like, putative Get druggable targets OG5_129743 All targets in OG5_129743
Candida albicans dipeptidyl aminopeptidase B Get druggable targets OG5_128614 All targets in OG5_128614
Brugia malayi prolyl oligopeptidase family protein Get druggable targets OG5_129743 All targets in OG5_129743
Schistosoma mansoni subfamily S9B unassigned peptidase (S09 family) Get druggable targets OG5_128614 All targets in OG5_128614
Schistosoma japonicum ko:K01278 dipeptidyl-peptidase 4, putative Get druggable targets OG5_128614 All targets in OG5_128614
Leishmania donovani serine peptidase, Clan SC, Family S9B Get druggable targets OG5_129743 All targets in OG5_129743
Leishmania braziliensis dipeptidyl-peptidase 8-like serine peptidase, putative,serine peptidase, Clan SC, Family S9B Get druggable targets OG5_129743 All targets in OG5_129743
Schistosoma japonicum ko:K08656 dipeptidyl-peptidase 9, putative Get druggable targets OG5_129743 All targets in OG5_129743
Leishmania major dipeptidyl-peptidase 8-like serine peptidase, putative,serine peptidase, Clan SC, Family S9B Get druggable targets OG5_129743 All targets in OG5_129743
Leishmania infantum dipeptidyl-peptidase 8-like serine peptidase, putative,serine peptidase, Clan SC, Family S9B Get druggable targets OG5_129743 All targets in OG5_129743
Trypanosoma brucei gambiense dipeptidyl-peptidase 8-like serine protease Get druggable targets OG5_129743 All targets in OG5_129743
Trypanosoma brucei serine peptidase, Clan SC, Family S9B Get druggable targets OG5_129743 All targets in OG5_129743
Brugia malayi prolyl oligopeptidase family protein Get druggable targets OG5_128614 All targets in OG5_128614
Echinococcus granulosus Dipeptidyl peptidase 9 Get druggable targets OG5_129743 All targets in OG5_129743
Echinococcus granulosus dipeptidyl aminopeptidaseprotein Get druggable targets OG5_128614 All targets in OG5_128614
Onchocerca volvulus Dipeptidyl peptidase family member 1 homolog Get druggable targets OG5_128614 All targets in OG5_128614
Loa Loa (eye worm) prolyl oligopeptidase Get druggable targets OG5_128614 All targets in OG5_128614
Candida albicans dipeptidyl aminopeptidase B Get druggable targets OG5_128614 All targets in OG5_128614
Trypanosoma cruzi dipeptidyl-peptidase 8-like serine peptidase Get druggable targets OG5_129743 All targets in OG5_129743

By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Schistosoma mansoni ubiquitin ligase sina (ec 6.3.2.-) (seven in absentia homolog)(smsina) 0.1538 1 1
Onchocerca volvulus Dipeptidyl peptidase family member 1 homolog 0.028 0.0539 0.5
Echinococcus granulosus e3 ubiquitin protein ligase siah1 0.1538 1 1
Leishmania major dipeptidyl-peptidase 8-like serine peptidase, putative,serine peptidase, Clan SC, Family S9B 0.0208 0 0.5
Trypanosoma brucei serine peptidase, Clan SC, Family S9B 0.0208 0 0.5
Echinococcus multilocularis dipeptidyl aminopeptidaseprotein 0.028 0.0539 0.0539
Loa Loa (eye worm) hypothetical protein 0.1538 1 1
Trypanosoma cruzi serine peptidase, Clan SC, Family S9B 0.0208 0 0.5
Trypanosoma brucei Dipeptidyl-peptidase 8-like, putative 0.0208 0 0.5
Trypanosoma cruzi dipeptidyl-peptidase 8-like serine peptidase 0.0208 0 0.5
Echinococcus granulosus dipeptidyl aminopeptidaseprotein 0.028 0.0539 0.0539
Brugia malayi prolyl oligopeptidase family protein 0.028 0.0539 0.0539
Echinococcus multilocularis e3 ubiquitin protein ligase siah1 0.1538 1 1
Schistosoma mansoni subfamily S9B unassigned peptidase (S09 family) 0.028 0.0539 0.0539

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) = 238 nM Inhibitory concentration against Dipeptidyl-peptidase IV [DPP-IV] ChEMBL. 15927466
IC50 (binding) = 238 nM Inhibitory concentration against Dipeptidyl-peptidase IV [DPP-IV] ChEMBL. 15927466
IC50 (binding) = 389 nM Inhibitory concentration against Dipeptidyl-peptidase 8 ChEMBL. 15927466
IC50 (binding) = 389 nM Inhibitory concentration against Dipeptidyl-peptidase 8 ChEMBL. 15927466

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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