Detailed information for compound 575979

Basic information

Technical information
  • TDR Targets ID: 575979
  • Name: 2,4-dioxo-1H-pyrimidine-6-carboxylate
  • MW: 155.088 | Formula: C5H3N2O4-
  • H donors: 2 H acceptors: 4 LogP: -0.59 Rotable bonds: 1
    Rule of 5 violations (Lipinski): 1
  • SMILES: O=c1[nH]c(=O)[nH]c(c1)C(=O)[O-]
  • InChi: 1S/C5H4N2O4/c8-3-1-2(4(9)10)6-5(11)7-3/h1H,(H,9,10)(H2,6,7,8,11)/p-1
  • InChiKey: PXQPEWDEAKTCGB-UHFFFAOYSA-M  

Network

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Synonyms

  • orotate
  • Orotic Acid
  • 2,6-dioxo-3H-pyrimidine-4-carboxylate
  • 2,6-diketo-3H-pyrimidine-4-carboxylate
  • 50887-69-9
  • 73-97-2
  • ZINC00895161
  • 2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylate
  • CHEBI:30839

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Plasmodium falciparum dihydroorotate dehydrogenase Curated by TDR Targets No references

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Trypanosoma cruzi dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania mexicana dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Schistosoma japonicum ko:K00226 dihydroorotate oxidase [EC1.3.3.1], putative Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma congolense dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Toxoplasma gondii dihydroorotate dehydrogenase reveal, putative Get druggable targets OG5_127289 All targets in OG5_127289
Mycobacterium ulcerans dihydroorotate dehydrogenase 2 Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma cruzi dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania donovani dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma brucei dihydroorotate dehydrogenase (fumarate) Get druggable targets OG5_127289 All targets in OG5_127289
Mycobacterium leprae Probable dihydroorotate dehydrogenase PyrD Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma brucei gambiense dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Mycobacterium tuberculosis Probable dihydroorotate dehydrogenase PyrD Get druggable targets OG5_127289 All targets in OG5_127289
Brugia malayi Dihydroorotate dehydrogenase, mitochondrial precursor, putative Get druggable targets OG5_127289 All targets in OG5_127289
Candida albicans likely dihydroorotate oxidase similar to S. pombe ura3 (SPAC57A10.12c) and to S. cerevisiae URA1 (YKL216W) involved in pyrimidin Get druggable targets OG5_127289 All targets in OG5_127289
Plasmodium berghei dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Wolbachia endosymbiont of Brugia malayi dihydroorotate dehydrogenase 2 Get druggable targets OG5_127289 All targets in OG5_127289
Theileria parva dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania major dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Brugia malayi Dihydroorotate dehydrogenase, mitochondrial precursor, putative Get druggable targets OG5_127289 All targets in OG5_127289
Neospora caninum dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Plasmodium falciparum dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Candida albicans likely dihydroorotate oxidase similar to S. pombe ura3 (SPAC57A10.12c) and to S. cerevisiae URA1 (YKL216W) involved in pyrimidin Get druggable targets OG5_127289 All targets in OG5_127289
Schistosoma mansoni dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma cruzi dihydroorotate dehydrogenase (fumarate), putative Get druggable targets OG5_127289 All targets in OG5_127289
Plasmodium vivax dihydroorotate dehydrogenase, mitochondrial precursor, putative Get druggable targets OG5_127289 All targets in OG5_127289
Babesia bovis dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Plasmodium yoelii dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania braziliensis dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Plasmodium knowlesi dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania infantum dihydroorotate dehydrogenase;with=GeneDB:LmjF16.0530 Get druggable targets OG5_127289 All targets in OG5_127289

By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Echinococcus multilocularis Basic leucine zipper (bZIP) transcription factor 0.0101 0.4665 0.6346
Brugia malayi Cytochrome P450 family protein 0.002 0.0272 0.0148
Plasmodium vivax dihydroorotate dehydrogenase, mitochondrial precursor, putative 0.02 1 1
Loa Loa (eye worm) acetyltransferase 0.0151 0.7333 1
Schistosoma mansoni aldehyde dehydrogenase 0.0061 0.2476 0.1693
Brugia malayi Zinc finger, C2H2 type family protein 0.0078 0.3406 0.3323
Echinococcus granulosus jun protein 0.0101 0.4665 0.6551
Echinococcus multilocularis jun protein 0.0101 0.4665 0.6346
Echinococcus multilocularis lamin 0.0033 0.0943 0.1248
Echinococcus granulosus histone acetyltransferase KAT2B 0.0147 0.7105 1
Plasmodium falciparum dihydroorotate dehydrogenase 0.02 1 1
Echinococcus granulosus intermediate filament protein 0.0033 0.0943 0.1288
Echinococcus granulosus Basic leucine zipper bZIP transcription factor 0.0101 0.4665 0.6551
Trichomonas vaginalis dihydroorotate dehydrogenase, putative 0.0078 0.3406 1
Echinococcus granulosus dihydropyrimidine dehydrogenase NADP 0.0078 0.3406 0.4771
Mycobacterium ulcerans aldehyde dehydrogenase 0.0061 0.2476 0.2266
Loa Loa (eye worm) cytochrome P450 family protein 0.002 0.0272 0.0371
Toxoplasma gondii aldehyde dehydrogenase 0.0061 0.2476 0.1065
Mycobacterium ulcerans aldehyde dehydrogenase 0.0061 0.2476 0.2266
Brugia malayi Intermediate filament tail domain containing protein 0.0033 0.0943 0.0828
Trichomonas vaginalis dihydroorotate dehydrogenase, putative 0.0078 0.3406 1
Trichomonas vaginalis dihydroorotate dehydrogenase, putative 0.0078 0.3406 1
Brugia malayi Cytochrome P450 family protein 0.002 0.0272 0.0148
Trichomonas vaginalis dihydropyrimidine dehydrogenase, putative 0.0078 0.3406 1
Schistosoma mansoni aldehyde dehydrogenase 0.0061 0.2476 0.1693
Entamoeba histolytica dihydropyrimidine dehydrogenase, putative 0.0078 0.3406 1
Loa Loa (eye worm) cytochrome P450 family protein 0.002 0.0272 0.0371
Loa Loa (eye worm) cytochrome P450 family protein 0.0051 0.1926 0.2626
Trichomonas vaginalis dihydroorotate dehydrogenase, putative 0.0078 0.3406 1
Echinococcus multilocularis dihydropyrimidine dehydrogenase (NADP+) 0.0078 0.3406 0.4622
Leishmania major dihydroorotate dehydrogenase 0.02 1 1
Onchocerca volvulus 0.008 0.3488 1
Trypanosoma cruzi dihydroorotate dehydrogenase, putative 0.0078 0.3406 0.3222
Trypanosoma cruzi dihydroorotate dehydrogenase (fumarate), putative 0.02 1 1
Loa Loa (eye worm) cytoplasmic intermediate filament protein 0.0017 0.0126 0.0171
Giardia lamblia Histone acetyltransferase GCN5 0.0041 0.138 0.5
Echinococcus multilocularis musashi 0.0033 0.0943 0.1248
Echinococcus granulosus aldehyde dehydrogenase mitochondrial 0.0061 0.2476 0.3456
Toxoplasma gondii dihydroorotate dehydrogenase reveal, putative 0.02 1 1
Echinococcus granulosus dihydropyrimidine dehydrogenase NADP 0.0078 0.3406 0.4771
Echinococcus granulosus lamin 0.0033 0.0943 0.1288
Schistosoma mansoni jun-related protein 0.0082 0.3638 0.2976
Trichomonas vaginalis dihydroorotate dehydrogenase, putative 0.0078 0.3406 1
Brugia malayi Cytochrome P450 family protein 0.0051 0.1926 0.1823
Trypanosoma brucei dihydroorotate dehydrogenase (fumarate) 0.02 1 1
Loa Loa (eye worm) hypothetical protein 0.0033 0.0943 0.1286
Brugia malayi hypothetical protein 0.008 0.3488 0.3405
Schistosoma mansoni gcn5proteinral control of amino-acid synthesis 5-like 2 gcnl2 0.0151 0.7333 0.7056
Schistosoma mansoni dihydroorotate dehydrogenase 0.02 1 1
Echinococcus granulosus lamin dm0 0.0033 0.0943 0.1288
Loa Loa (eye worm) intermediate filament protein 0.0033 0.0943 0.1286
Brugia malayi bZIP transcription factor family protein 0.0101 0.4665 0.4597
Brugia malayi Dihydroorotate dehydrogenase, mitochondrial precursor, putative 0.02 1 1
Trypanosoma cruzi dihydroorotate dehydrogenase, putative 0.02 1 1
Brugia malayi acetyltransferase, GNAT family protein 0.0151 0.7333 0.7299
Mycobacterium tuberculosis Probable dihydroorotate dehydrogenase PyrD 0.02 1 1
Loa Loa (eye worm) intermediate filament tail domain-containing protein 0.0033 0.0943 0.1286
Loa Loa (eye worm) hypothetical protein 0.0099 0.4515 0.6157
Echinococcus multilocularis dihydropyrimidine dehydrogenase (NADP+) 0.0078 0.3406 0.4622
Trypanosoma cruzi dihydroorotate dehydrogenase, putative 0.02 1 1
Schistosoma mansoni hypothetical protein 0.0082 0.3638 0.2976
Echinococcus multilocularis aldehyde dehydrogenase, mitochondrial 0.0061 0.2476 0.3348
Brugia malayi intermediate filament protein 0.0033 0.0943 0.0828
Loa Loa (eye worm) CYP4Cod1 0.002 0.0272 0.0371
Mycobacterium ulcerans aldehyde dehydrogenase 0.0061 0.2476 0.2266
Mycobacterium leprae Probable dihydroorotate dehydrogenase PyrD 0.02 1 0.5
Wolbachia endosymbiont of Brugia malayi dihydroorotate dehydrogenase 2 0.02 1 0.5
Echinococcus multilocularis lamin dm0 0.0033 0.0943 0.1248
Leishmania major aldehyde dehydrogenase, mitochondrial precursor 0.0061 0.2476 0.2266
Loa Loa (eye worm) hypothetical protein 0.0032 0.0911 0.1242
Echinococcus granulosus histone acetyltransferase KAT2B 0.0044 0.1579 0.2188
Loa Loa (eye worm) hypothetical protein 0.0016 0.0032 0.0044
Mycobacterium ulcerans dihydroorotate dehydrogenase 2 0.02 1 1
Echinococcus multilocularis gcn5proteinral control of amino acid synthesis 0.0151 0.7333 1

Activities

No activities found for this compound.

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

59 literature references were collected for this gene.

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