Detailed information for compound 102637

Basic information

Technical information
  • TDR Targets ID: 102637
  • Name: 4-methyl-2-oxo-N-[2-(1-phenylindol-3-yl)ethyl ]pentanamide
  • MW: 348.438 | Formula: C22H24N2O2
  • H donors: 1 H acceptors: 2 LogP: 4.38 Rotable bonds: 8
    Rule of 5 violations (Lipinski): 1
  • SMILES: CC(CC(=O)C(=O)NCCc1cn(c2c1cccc2)c1ccccc1)C
  • InChi: 1S/C22H24N2O2/c1-16(2)14-21(25)22(26)23-13-12-17-15-24(18-8-4-3-5-9-18)20-11-7-6-10-19(17)20/h3-11,15-16H,12-14H2,1-2H3,(H,23,26)
  • InChiKey: MPFJVTXECQSEHQ-UHFFFAOYSA-N  

Network

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Synonyms

  • 4-methyl-2-oxo-N-[2-(1-phenyl-3-indolyl)ethyl]pentanamide
  • 2-keto-4-methyl-N-[2-(1-phenylindol-3-yl)ethyl]valeramide

Targets

Known targets for this compound

No curated genes were found associated with this compound

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Leishmania major apurinic/apyrimidinic endonuclease-redox protein 0.0038 0.0364 1
Echinococcus granulosus guanine nucleotide binding protein subunit 0.001 0.0014 0.0006
Loa Loa (eye worm) nucleolar RNA-associated protein alpha 0.0317 0.3801 1
Treponema pallidum hypothetical protein 0.0309 0.3709 1
Echinococcus granulosus snurportin 1 0.0317 0.3801 1
Echinococcus multilocularis expressed protein 0.001 0.0014 0.0002
Brugia malayi GTP-binding nuclear protein RAN/TC4 0.0022 0.016 0.0539
Plasmodium falciparum nicotinamide/nicotinic acid mononucleotide adenylyltransferase 0.0309 0.3709 1
Plasmodium falciparum importin beta, putative 0.003 0.0257 0.0273
Entamoeba histolytica Ran family GTPase 0.0022 0.016 0.1282
Loa Loa (eye worm) guanine nucleotide-binding protein alpha-12 subunit 0.001 0.0014 0.0038
Schistosoma mansoni GTP-binding protein alpha subunit 0.001 0.0014 0.0006
Brugia malayi GTP-binding regulatory protein Gs alpha-S chain, putative 0.0233 0.2766 1
Trichomonas vaginalis inositol monophosphatase, putative 0.0038 0.0355 0.1562
Echinococcus multilocularis protein dispatched 1 0.005 0.0509 0.0498
Loa Loa (eye worm) hypothetical protein 0.0102 0.1154 0.3036
Plasmodium vivax nicotinate-nucleotide adenylyltransferase, putative 0.0309 0.3709 1
Brugia malayi Importin beta-1 subunit 0.003 0.0257 0.089
Entamoeba histolytica myo-inositol monophosphatase, putative 0.0038 0.0355 0.2994
Loa Loa (eye worm) nuclear hormone receptor family member nhr-14 0.001 0.0012 0.0032
Echinococcus granulosus gtp binding protein I alpha 1subunit 0.001 0.0014 0.0006
Echinococcus multilocularis muscleblind protein 1 0.0145 0.1682 0.1672
Schistosoma mansoni ap endonuclease 0.0038 0.0364 0.0929
Schistosoma mansoni GTP-binding protein (q) alpha-11 subunit gna11 0.001 0.0014 0.0006
Schistosoma mansoni ap endonuclease 0.0038 0.0364 0.0929
Loa Loa (eye worm) hypothetical protein 0.0054 0.0555 0.146
Echinococcus multilocularis snurportin 1 0.0317 0.3801 0.3794
Schistosoma mansoni niemann-pick C1 (NPC1) 0.0104 0.1173 0.3065
Echinococcus multilocularis geminin 0.0169 0.1972 0.1962
Trypanosoma cruzi myo-inositol-1(or 4)-monophosphatase 1, putative 0.0038 0.0355 0.9729
Trypanosoma cruzi apurinic/apyrimidinic endonuclease, putative 0.0038 0.0364 1
Loa Loa (eye worm) guanine nucleotide-binding protein alpha-6 subunit 0.001 0.0014 0.0038
Brugia malayi Voltage-gated calcium channel, T-type, alpha subunit. C. elegans cca-1 ortholog 0.0192 0.2264 0.8176
Toxoplasma gondii inositol(myo)-1(or 4)-monophosphatase 2, putative 0.0038 0.0355 0.9574
Echinococcus granulosus Protein patched homolog 1 0.0044 0.0433 0.1111
Loa Loa (eye worm) hypothetical protein 0.001 0.0012 0.0032
Mycobacterium tuberculosis Probable nicotinate-nucleotide adenylyltransferase NadD (deamido-NAD(+) pyrophosphorylase) (deamido-NAD(+) diphosphorylase) (nic 0.0309 0.3709 1
Echinococcus multilocularis Niemann Pick C1 protein 0.0146 0.1696 0.1686
Brugia malayi GTP-binding regulatory protein alpha chain - starfish, putative 0.001 0.0014 0.0008
Echinococcus multilocularis guanine nucleotide binding protein G(s) subunit 0.0233 0.2766 0.2758
Schistosoma mansoni GTP-binding protein (I) alpha-1subunit gnai1 0.001 0.0014 0.0006
Schistosoma mansoni hypothetical protein 0.0169 0.1972 0.5172
Loa Loa (eye worm) hypothetical protein 0.001 0.0012 0.0032
Schistosoma mansoni patched 1 0.0044 0.0433 0.1111
Schistosoma mansoni GTP-binding protein alpha subunit gna 0.001 0.0014 0.0006
Schistosoma mansoni GTP-binding protein alpha subunit 0.001 0.0014 0.0006
Trichomonas vaginalis ap endonuclease, putative 0.0038 0.0364 0.1601
Schistosoma mansoni GTP-binding protein alpha subunit gna 0.001 0.0014 0.0006
Loa Loa (eye worm) hypothetical protein 0.001 0.0012 0.0032
Echinococcus multilocularis GTP binding nuclear protein Ran 0.0022 0.016 0.0149
Brugia malayi Cytochrome P450 family protein 0.0012 0.0044 0.0117
Mycobacterium ulcerans bifunctional nicotinate-nucleotide adenylyltransferase NadD/hypothetical protein 0.0309 0.3709 1
Loa Loa (eye worm) steroid hormone receptor 0.001 0.0012 0.0032
Loa Loa (eye worm) CYP4Cod1 0.0012 0.0044 0.0116
Loa Loa (eye worm) heterotrimeric G protein alpha subunit 0.001 0.0014 0.0038
Echinococcus multilocularis guanine nucleotide binding protein subunit 0.001 0.0014 0.0002
Loa Loa (eye worm) nuclear Hormone Receptor family member 0.001 0.0012 0.0032
Entamoeba histolytica exodeoxyribonuclease III, putative 0.0038 0.0364 0.307
Loa Loa (eye worm) cytochrome P450 family protein 0.0012 0.0044 0.0116
Schistosoma mansoni hypothetical protein 0.0042 0.0413 0.1059
Leishmania major myo-inositol-1(or 4)-monophosphatase 1, putative 0.0038 0.0355 0.9729
Giardia lamblia Endonuclease/Exonuclease/phosphatase 0.0038 0.0364 1
Mycobacterium ulcerans exodeoxyribonuclease III protein XthA 0.0038 0.0364 0.0873
Echinococcus granulosus sterol regulatory element binding protein 0.0044 0.0433 0.1111
Echinococcus granulosus expressed protein 0.001 0.0014 0.0006
Brugia malayi guanine nucleotide-binding protein G-o protein alpha subunit 0.001 0.0014 0.0008
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0233 0.2766 0.7269
Plasmodium falciparum AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative 0.0038 0.0364 0.0574
Echinococcus multilocularis protein patched 0.0044 0.0433 0.0421
Schistosoma mansoni hypothetical protein 0.0169 0.1972 0.5172
Loa Loa (eye worm) hypothetical protein 0.001 0.0014 0.0038
Schistosoma mansoni hypothetical protein 0.0317 0.3801 1
Schistosoma mansoni hypothetical protein 0.0042 0.0413 0.1059
Echinococcus multilocularis expressed conserved protein 0.0096 0.1077 0.1067
Echinococcus multilocularis guanine nucleotide binding protein subunit 0.001 0.0014 0.0002
Loa Loa (eye worm) hypothetical protein 0.0192 0.2264 0.5956
Trichomonas vaginalis conserved hypothetical protein 0.0187 0.2199 1
Brugia malayi Niemann-Pick C1 protein precursor 0.0102 0.1154 0.4146
Trichomonas vaginalis ap endonuclease, putative 0.0038 0.0364 0.1601
Trichomonas vaginalis ran, putative 0.0022 0.016 0.0669
Wolbachia endosymbiont of Brugia malayi exonuclease III 0.0038 0.0364 1
Echinococcus multilocularis muscleblind protein 0.0145 0.1682 0.1672
Brugia malayi guanine nucleotide-binding protein alpha-3 subunit, putative 0.001 0.0014 0.0008
Leishmania major GTP-binding protein, putative 0.0022 0.016 0.3632
Brugia malayi RNA, U transporter 1 0.0084 0.0932 0.3342
Schistosoma mansoni inositol monophosphatase 0.0038 0.0355 0.0906
Loa Loa (eye worm) nuclear hormone receptor family member nhr-49 0.001 0.0012 0.0032
Loa Loa (eye worm) hypothetical protein 0.003 0.0257 0.0676
Trypanosoma brucei GTP-binding nuclear protein rtb2, putative 0.0022 0.016 0.3632
Schistosoma mansoni GTP-binding protein (I) alpha-1subunit gnai1 0.001 0.0014 0.0006
Mycobacterium tuberculosis Probable exodeoxyribonuclease III protein XthA (exonuclease III) (EXO III) (AP endonuclease VI) 0.0038 0.0364 0.0169
Trichomonas vaginalis myo inositol monophosphatase, putative 0.0038 0.0355 0.1562
Brugia malayi Guanine nucleotide-binding protein alpha-12 subunit, putative 0.001 0.0014 0.0008
Echinococcus granulosus GTP binding nuclear protein Ran 0.0022 0.016 0.0392
Toxoplasma gondii HEAT repeat-containing protein 0.003 0.0257 0.4746
Brugia malayi Muscleblind-like protein 0.0145 0.1682 0.6065
Brugia malayi hypothetical protein 0.001 0.0014 0.0008
Schistosoma mansoni hypothetical protein 0.0042 0.0413 0.1059
Echinococcus granulosus inositol monophosphatase 1 0.0038 0.0355 0.0906
Loa Loa (eye worm) nuclear hormone receptor family member nhr-41 0.001 0.0012 0.0032
Echinococcus multilocularis sterol regulatory element binding protein 0.0044 0.0433 0.0421
Schistosoma mansoni ran 0.0022 0.016 0.0392
Loa Loa (eye worm) GTP-binding regulatory protein Gs alpha-S chain 0.0233 0.2766 0.7278
Onchocerca volvulus 0.001 0.0014 1
Echinococcus granulosus guanine nucleotide binding protein G protein 0.001 0.0014 0.0006
Loa Loa (eye worm) hypothetical protein 0.0145 0.1682 0.4426
Echinococcus granulosus guanine nucleotide binding protein subunit 0.001 0.0014 0.0006
Trichomonas vaginalis importin beta-1, putative 0.0024 0.0188 0.0794
Mycobacterium ulcerans extragenic suppressor protein SuhB 0.0038 0.0355 0.085
Entamoeba histolytica Niemann-Pick C1 protein, putative 0.0102 0.1154 1
Schistosoma mansoni GTP-binding protein (I) alpha-2 subunit gnai2 0.001 0.0014 0.0006
Loa Loa (eye worm) hypothetical protein 0.001 0.0012 0.0032
Loa Loa (eye worm) hypothetical protein 0.001 0.0012 0.0032
Loa Loa (eye worm) GTP-binding regulatory protein alpha chain 0.001 0.0014 0.0038
Trypanosoma brucei apurinic/apyrimidinic endonuclease, putative 0.0038 0.0364 1
Schistosoma mansoni inositol monophosphatase 0.0038 0.0355 0.0906
Loa Loa (eye worm) nuclear hormone receptor family member nhr-31 0.001 0.0012 0.0032
Brugia malayi G-protein alpha subunit 0.001 0.0014 0.0008
Trichomonas vaginalis Importin beta-1 subunit, putative 0.0024 0.0188 0.0794
Echinococcus multilocularis Niemann Pick C1 protein 0.0102 0.1154 0.1143
Echinococcus multilocularis DNA (apurinic or apyrimidinic site) lyase 0.0038 0.0364 0.0353
Loa Loa (eye worm) hypothetical protein 0.001 0.0014 0.0038
Echinococcus multilocularis gtp binding protein (I) alpha 1subunit 0.001 0.0014 0.0002
Schistosoma mansoni trimeric G-protein alpha o subunit 0.001 0.0014 0.0006
Brugia malayi Inositol-1 0.0038 0.0355 0.1247
Brugia malayi Guanine nucleotide-binding protein alpha-3 subunit, putative 0.001 0.0014 0.0008
Plasmodium vivax importin-beta 2, putative 0.003 0.0257 0.0273
Loa Loa (eye worm) inositol-1 0.0038 0.0355 0.0935
Trypanosoma brucei importin beta-1 subunit, putative 0.003 0.0257 0.6654
Mycobacterium leprae PROBABLE NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE NADD (DEAMIDO-NAD(+) PYROPHOSPHORYLASE) (DEAMIDO-NAD(+) DIPHOSPHORYLASE) (NIC 0.0309 0.3709 1
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0233 0.2766 0.7269
Schistosoma mansoni importin beta-1 0.003 0.0257 0.0647
Schistosoma mansoni GTP-binding protein (I) alpha subunit gnai 0.001 0.0014 0.0006
Loa Loa (eye worm) abnormal chemotaxis protein 14 0.0044 0.0433 0.1139
Brugia malayi guanine nucleotide-binding protein G(o), alpha subunit, putative 0.001 0.0014 0.0008
Brugia malayi Guanine nucleotide-binding protein alpha-3 subunit, putative 0.001 0.0014 0.0008
Leishmania major importin beta-1 subunit, putative 0.0024 0.0188 0.4489
Onchocerca volvulus 0.001 0.0014 1
Echinococcus granulosus muscleblind protein 0.0145 0.1682 0.4409
Toxoplasma gondii exonuclease III APE 0.0038 0.0364 1
Loa Loa (eye worm) hypothetical protein 0.0044 0.0433 0.1139
Trypanosoma brucei inositol-1(or 4)-monophosphatase 1, putative 0.0038 0.0355 0.9729
Trichomonas vaginalis conserved hypothetical protein 0.0044 0.0433 0.1916
Plasmodium vivax AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative 0.0038 0.0364 0.0574
Trypanosoma cruzi GTP-binding nuclear protein rtb2, putative 0.0022 0.016 0.3632
Loa Loa (eye worm) nuclear hormone receptor family member nhr-40 0.001 0.0012 0.0032
Echinococcus multilocularis guanine nucleotide binding protein G(s) subunit 0.0233 0.2766 0.2758
Loa Loa (eye worm) hypothetical protein 0.001 0.0014 0.0038
Loa Loa (eye worm) hypothetical protein 0.001 0.0012 0.0032
Echinococcus multilocularis importin subunit beta 1 0.003 0.0257 0.0245
Echinococcus granulosus expressed conserved protein 0.0096 0.1077 0.2811
Echinococcus granulosus guanine nucleotide binding protein G protein 0.001 0.0014 0.0006
Schistosoma mansoni GTP-binding protein (I) alpha-2 subunit gnai2 0.001 0.0014 0.0006
Loa Loa (eye worm) GTP-binding nuclear protein RAN/TC4 0.0022 0.016 0.0422
Schistosoma mansoni ran 0.0022 0.016 0.0392
Loa Loa (eye worm) hypothetical protein 0.001 0.0014 0.0038
Loa Loa (eye worm) hypothetical protein 0.001 0.0014 0.0038
Echinococcus granulosus guanine nucleotide binding protein Gs subunit 0.0233 0.2766 0.7269
Trichomonas vaginalis Importin beta-1 subunit, putative 0.0024 0.0188 0.0794
Loa Loa (eye worm) cytochrome P450 family protein 0.0012 0.0044 0.0116
Trypanosoma cruzi importin beta-1 subunit, putative 0.0024 0.0188 0.4489
Echinococcus granulosus Niemann Pick C1 protein 0.0102 0.1154 0.3014
Echinococcus multilocularis guanine nucleotide binding protein (G protein) 0.001 0.0014 0.0002
Brugia malayi Guanine nucleotide-binding protein alpha-6 subunit, putative 0.001 0.0014 0.0008
Echinococcus granulosus Niemann Pick C1 protein 0.0146 0.1696 0.4444
Schistosoma mansoni GTP-binding protein (I) alpha-2 subunit gnai2 0.001 0.0014 0.0006
Echinococcus multilocularis inositol monophosphatase 1 0.0038 0.0355 0.0344
Onchocerca volvulus 0.001 0.0014 1
Trypanosoma cruzi apurinic/apyrimidinic endonuclease 0.0038 0.0364 1
Brugia malayi CHE-14 protein 0.0044 0.0433 0.1528
Schistosoma mansoni GTP-binding protein (q) alpha-11 subunit gna11 0.001 0.0014 0.0006
Entamoeba histolytica hypothetical protein 0.0024 0.0188 0.1522
Echinococcus multilocularis guanine nucleotide binding protein (G protein) 0.001 0.0014 0.0002
Loa Loa (eye worm) hypothetical protein 0.001 0.0012 0.0032
Echinococcus granulosus DNA apurinic or apyrimidinic site lyase 0.0038 0.0364 0.0929
Schistosoma mansoni hypothetical protein 0.0042 0.0413 0.1059
Loa Loa (eye worm) nuclear hormone receptor family member nhr-1 0.001 0.0012 0.0032
Loa Loa (eye worm) G protein alpha subunit 3 0.001 0.0014 0.0038
Brugia malayi guanine nucleotide-binding protein alpha-7 subunit, putative 0.001 0.0014 0.0008
Loa Loa (eye worm) hypothetical protein 0.0145 0.1682 0.4426
Trypanosoma cruzi GTP-binding nuclear protein rtb2, putative 0.0022 0.016 0.3632
Echinococcus granulosus importin subunit beta 1 0.003 0.0257 0.0647
Brugia malayi Cytochrome P450 family protein 0.0012 0.0044 0.0117
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0233 0.2766 0.7269
Trypanosoma brucei importin beta-1 subunit, putative 0.003 0.0257 0.6654
Echinococcus granulosus geminin 0.0169 0.1972 0.5172
Trypanosoma cruzi myo-inositol-1(or 4)-monophosphatase 1, putative 0.0038 0.0355 0.9729
Echinococcus granulosus guanine nucleotide binding protein Gs subunit 0.0233 0.2766 0.7269
Trichomonas vaginalis myo inositol monophosphatase, putative 0.0038 0.0355 0.1562
Loa Loa (eye worm) hypothetical protein 0.001 0.0012 0.0032
Loa Loa (eye worm) exodeoxyribonuclease III family protein 0.0038 0.0364 0.0958
Brugia malayi exodeoxyribonuclease III family protein 0.0038 0.0364 0.1278

Activities

Activity type Activity value Assay description Source Reference
MIC (functional) = 0.015 ug ml-1 In vitro minimum inhibitory concentration in iso sensitest agar against Staphylococcus hyicus strain ATCC 9622 ChEMBL. 9873483
MIC (functional) = 0.03 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus aureus strain ATCC 6538 ChEMBL. 9873483
MIC (functional) = 0.06 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus aureus strain ATCC 25923 ChEMBL. 9873483
MIC (functional) = 0.06 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus aureus strain ATCC 29213 ChEMBL. 9873483
MIC (functional) = 0.06 ug ml-1 In vitrIn vitro inhibitory activity in iso sensitest agar against Staphylococcus hyicus strain ATCC 9621 ChEMBL. 9873483
MIC (functional) = 0.125 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus intermedius strain ATCC 9503 ChEMBL. 9873483
MIC (functional) = 1 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus intermedius strain ATCC 29663 ChEMBL. 9873483
MIC (functional) > 64 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus aureus strain ATCC 6538 in addition with 5%serum ChEMBL. 9873483
MIC (functional) > 64 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus aureus strain ATCC 25923 in addition with 5%serum ChEMBL. 9873483
MIC (functional) > 64 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus aureus strain ATCC 29213 in addition with 5%serum ChEMBL. 9873483
MIC (functional) > 64 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus hyicus strain ATCC 9621 in addition with 5%serum ChEMBL. 9873483
MIC (functional) > 64 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus hyicus strain ATCC 9622 in addition with 5%serum ChEMBL. 9873483
MIC (functional) > 64 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus intermedius strain ATCC 29663 in addition with 5%serum ChEMBL. 9873483
MIC (functional) > 64 ug ml-1 In vitro inhibitory activity in iso sensitest agar against Staphylococcus intermedius strain ATCC 9503 in addition with 5%serum ChEMBL. 9873483

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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