Detailed information for compound 156855

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 179.601 | Formula: C6H10ClNO3
  • H donors: 2 H acceptors: 3 LogP: -2.73 Rotable bonds: 5
    Rule of 5 violations (Lipinski): 1
  • SMILES: ClCC(=O)CC[C@@H](C(=O)O)N
  • InChi: 1S/C6H10ClNO3/c7-3-4(9)1-2-5(8)6(10)11/h5H,1-3,8H2,(H,10,11)/t5-/m0/s1
  • InChiKey: QDTBRNQZSXRTPI-YFKPBYRVSA-N  


Substructure search Similarity search

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

No curated genes were found associated with this compound

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Echinococcus granulosus farnesyl pyrophosphate synthase 0.1239 1 1
Plasmodium vivax geranylgeranyl pyrophosphate synthase 0.1239 1 1
Mycobacterium ulcerans geranylgeranyl pyrophosphate synthase 0.1239 1 1
Trypanosoma cruzi farnesyl pyrophosphate synthase, putative 0.1239 1 1
Treponema pallidum octaprenyl-diphosphate synthase 0.0413 0.0893 0.5
Trichomonas vaginalis geranylgeranyl pyrophosphate synthase, putative 0.1239 1 0.5
Trichomonas vaginalis geranylgeranyl pyrophosphate synthase, putative 0.1239 1 0.5
Trypanosoma cruzi farnesyl pyrophosphate synthase 0.1239 1 1
Wolbachia endosymbiont of Brugia malayi geranylgeranyl pyrophosphate synthase 0.0332 0 0.5
Trypanosoma brucei farnesyl pyrophosphate synthase 0.1239 1 1
Wolbachia endosymbiont of Brugia malayi geranylgeranyl pyrophosphate synthase 0.0332 0 0.5
Echinococcus multilocularis geranylgeranyl pyrophosphate synthase 0.0413 0.0893 0.0893
Echinococcus granulosus geranylgeranyl pyrophosphate synthase 0.0413 0.0893 0.0893
Trichomonas vaginalis geranylgeranyl diphosphate synthase, putative 0.1239 1 0.5
Plasmodium falciparum geranylgeranyl pyrophosphate synthase, putative 0.1239 1 1
Trypanosoma cruzi polyprenyl synthase, putative 0.0413 0.0893 0.0893
Leishmania major polyprenyl synthase, putative 0.0413 0.0893 0.0893
Loa Loa (eye worm) geranylgeranyl pyrophosphate synthetase 0.0413 0.0893 0.0893
Loa Loa (eye worm) polyprenyl synthetase 0.1239 1 1
Mycobacterium leprae PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) 0.0332 0 0.5
Chlamydia trachomatis geranylgeranyl pyrophosphate synthase 0.0332 0 0.5
Entamoeba histolytica bifunctional short chain isoprenyl diphosphate synthase, putative 0.0332 0 0.5
Trypanosoma cruzi polyprenyl synthase, putative 0.0413 0.0893 0.0893
Schistosoma mansoni farnesyl pyrophosphate synthase 0.1239 1 1
Mycobacterium tuberculosis Probable geranylgeranyl pyrophosphate synthetase IdsA2 (ggppsase) (GGPP synthetase) (geranylgeranyl diphosphate synthase) 0.1239 1 1
Toxoplasma gondii polyprenyl synthetase superfamily protein 0.1239 1 1
Brugia malayi geranylgeranyl pyrophosphate synthetase 0.0413 0.0893 0.0893
Leishmania major farnesyl pyrophosphate synthase 0.1239 1 1
Entamoeba histolytica geranylgeranyl pyrophosphate synthetase, putative 0.0332 0 0.5
Schistosoma mansoni geranylgeranyl pyrophosphate synthase 0.0413 0.0893 0.0893
Entamoeba histolytica geranylgeranyl pyrophosphate synthase, putative 0.0332 0 0.5
Echinococcus multilocularis farnesyl pyrophosphate synthase 0.1239 1 1
Mycobacterium ulcerans geranylgeranyl pyrophosphate synthase 0.1239 1 1
Giardia lamblia Farnesyl diphosphate synthase 0.1239 1 0.5

Activities

Activity type Activity value Assay description Source Reference
K+2 (binding) = 0.19 min-1 Limiting rate constant for inactivation of E. coli glucosamine synthetase was determined ChEMBL. 11133094
K+2/Ki (binding) = 0.003 uM min-1 Second order rate constant (Ki / K+2) of the compound was determined ChEMBL. 11133094
Ki (binding) = 62.5 uM Steady-state inactivation rate constant for inactivation of E. coli glucosamine synthetase was determined ChEMBL. 11133094

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

No external resources registered for this compound

Bibliographic References

1 literature reference was collected for this gene.

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