Detailed information for compound 318253

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 748.68 | Formula: C38H34F2N2O12
  • H donors: 3 H acceptors: 6 LogP: 3.04 Rotable bonds: 8
    Rule of 5 violations (Lipinski): 2
  • SMILES: COC(=O)CN1CCOCCOCCOCCOc2c1ccc(c2)NC(=O)c1ccc(c(c1)C(=O)O)c1c2cc(F)c(=O)cc2oc2c1cc(F)c(c2)O
  • InChi: 1S/C38H34F2N2O12/c1-49-35(45)20-42-6-7-50-8-9-51-10-11-52-12-13-53-34-15-22(3-5-29(34)42)41-37(46)21-2-4-23(24(14-21)38(47)48)36-25-16-27(39)30(43)18-32(25)54-33-19-31(44)28(40)17-26(33)36/h2-5,14-19,43H,6-13,20H2,1H3,(H,41,46)(H,47,48)
  • InChiKey: BOFIQWMUFVFCOH-UHFFFAOYSA-N  


Substructure search Similarity search

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

No curated genes were found associated with this compound

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Entamoeba histolytica geranylgeranyl pyrophosphate synthetase, putative 0.0537 0 0.5
Schistosoma mansoni geranylgeranyl pyrophosphate synthase 0.0697 0.1119 0.1119
Echinococcus multilocularis farnesyl pyrophosphate synthase 0.1972 1 1
Entamoeba histolytica geranylgeranyl pyrophosphate synthase, putative 0.0537 0 0.5
Leishmania major farnesyl pyrophosphate synthase 0.1972 1 1
Giardia lamblia Farnesyl diphosphate synthase 0.1972 1 0.5
Mycobacterium ulcerans geranylgeranyl pyrophosphate synthase 0.1972 1 1
Loa Loa (eye worm) polyprenyl synthetase 0.1972 1 1
Loa Loa (eye worm) geranylgeranyl pyrophosphate synthetase 0.0697 0.1119 0.1119
Mycobacterium leprae PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) 0.0537 0 0.5
Plasmodium falciparum geranylgeranyl pyrophosphate synthase, putative 0.1972 1 1
Trypanosoma cruzi polyprenyl synthase, putative 0.0697 0.1119 0.1119
Leishmania major polyprenyl synthase, putative 0.0697 0.1119 0.1119
Trypanosoma cruzi polyprenyl synthase, putative 0.0697 0.1119 0.1119
Schistosoma mansoni farnesyl pyrophosphate synthase 0.1972 1 1
Entamoeba histolytica bifunctional short chain isoprenyl diphosphate synthase, putative 0.0537 0 0.5
Brugia malayi geranylgeranyl pyrophosphate synthetase 0.0697 0.1119 0.1119
Toxoplasma gondii polyprenyl synthetase superfamily protein 0.1972 1 1
Mycobacterium tuberculosis Probable geranylgeranyl pyrophosphate synthetase IdsA2 (ggppsase) (GGPP synthetase) (geranylgeranyl diphosphate synthase) 0.1972 1 1
Chlamydia trachomatis geranylgeranyl pyrophosphate synthase 0.0537 0 0.5
Echinococcus multilocularis geranylgeranyl pyrophosphate synthase 0.0697 0.1119 0.1119
Wolbachia endosymbiont of Brugia malayi geranylgeranyl pyrophosphate synthase 0.0537 0 0.5
Trichomonas vaginalis geranylgeranyl diphosphate synthase, putative 0.1972 1 0.5
Echinococcus granulosus geranylgeranyl pyrophosphate synthase 0.0697 0.1119 0.1119
Treponema pallidum octaprenyl-diphosphate synthase 0.0697 0.1119 0.5
Trypanosoma cruzi farnesyl pyrophosphate synthase, putative 0.1972 1 1
Trichomonas vaginalis geranylgeranyl pyrophosphate synthase, putative 0.1972 1 0.5
Echinococcus granulosus farnesyl pyrophosphate synthase 0.1972 1 1
Plasmodium vivax geranylgeranyl pyrophosphate synthase 0.1972 1 1
Mycobacterium ulcerans geranylgeranyl pyrophosphate synthase 0.1972 1 1
Trypanosoma cruzi farnesyl pyrophosphate synthase 0.1972 1 1
Wolbachia endosymbiont of Brugia malayi geranylgeranyl pyrophosphate synthase 0.0537 0 0.5
Trypanosoma brucei farnesyl pyrophosphate synthase 0.1972 1 1
Trichomonas vaginalis geranylgeranyl pyrophosphate synthase, putative 0.1972 1 0.5

Activities

Activity type Activity value Assay description Source Reference
Kd (functional) = 59 mM The invitro binding constant of the compound in presence of Na+ measured in live Jurkat cells ChEMBL. 15780620
Kd (functional) = 59 mM The invitro binding constant of the compound in presence of Na+ measured in live Jurkat cells ChEMBL. 15780620
Kd (functional) = 65 mM The invitro binding constant of the compound in presence of Li+ was reported ChEMBL. 15780620
Kd (functional) = 144 mM The invitro binding constant of the compound in presence of Rb+ was reported ChEMBL. 15780620
Kd (functional) = 157 mM The invitro binding constant of the compound in presence of K+ was reported ChEMBL. 15780620

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

No external resources registered for this compound

Bibliographic References

1 literature reference was collected for this gene.

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