Detailed view for EmuJ_000426500

Basic information

TDR Targets ID: 956915
Echinococcus multilocularis, protein MICAL 3
Source Database / ID:  GeneDB

pI: 6.5077 | Length (AA): 1768 | MW (Da): 196778 | Paralog Number: 1

Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 0

Druggability Group : DG2

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

PF00412   LIM domain
PF01494   FAD binding domain

Gene Ontology

Mouse over links to read term descriptions.
GO:0071949   GO:FAD binding  

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

There are 6 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
11 671 4txi (A) 9 612 46.00 0 1 0.753469 0.05
577 653 1bkr (A) 7 80 32.00 0.0063 0.99 0.441152 -0.44
578 667 4z6g (A) 167 262 34.00 0.22 0.97 0.349505 -0.47
843 877 2dlo (A) 18 51 50.00 0.091 0.75 0.439396 1.3
843 895 2o10 (A) 10 58 35.00 0.064 1 0.391577 0.03
1505 1625 5szh (A) 546 664 25.00 0.37 0.34 0.406039 -1.19

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein

Expression

No expression data available for this gene

Orthologs

Ortholog group members (OG5_128687)

Species Accession Gene Product
Brugia malayi Bm1_43575   LIM domain containing protein
Drosophila melanogaster Dmel_CG33208   Molecule interacting with CasL
Echinococcus granulosus EgrG_000697300   MICAL protein 2
Echinococcus granulosus EgrG_000426500   protein MICAL 3
Echinococcus granulosus EgrG_000198800   hypothetical protein
Echinococcus multilocularis EmuJ_000697300   MICAL protein 2
Echinococcus multilocularis EmuJ_000426500   protein MICAL 3
Homo sapiens ENSG00000135596   microtubule associated monooxygenase, calponin and LIM domain containing 1
Homo sapiens ENSG00000133816   microtubule associated monooxygenase, calponin and LIM domain containing 2
Homo sapiens ENSG00000243156   microtubule associated monooxygenase, calponin and LIM domain containing 3
Loa Loa (eye worm) LOAG_08836   hypothetical protein
Loa Loa (eye worm) LOAG_09527   LIM domain-containing protein
Loa Loa (eye worm) LOAG_08835   hypothetical protein
Mus musculus ENSMUSG00000038244   microtubule associated monooxygenase, calponin and LIM domain containing 2
Mus musculus ENSMUSG00000003178   microtubule associated monooxygenase, calponin and LIM domain containing 3
Mus musculus ENSMUSG00000019823   microtubule associated monooxygenase, calponin and LIM domain containing 1
Schistosoma japonicum Sjp_0006090   Protein MICAL-3, putative
Schistosoma mansoni Smp_130440   hypothetical protein
Schmidtea mediterranea mk4.005452.00   Protein-methionine sulfoxide oxidase MICAL3
Schmidtea mediterranea mk4.001855.00  
Schmidtea mediterranea mk4.010936.01  
Schmidtea mediterranea mk4.004971.02  

Essentiality

No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Non orthologous druggable targets
By sequence similarity to non orthologous druggable targets
No additional associated druggable targets
Obtained from network model

Ranking Plot

Putative Drugs List

Compound Raw Global Species
0.0086 1 1
0.0206 1 0.5
0.0063 0.627 1
0.0066 1 1
0.0196 1 0.5
0.0213 1 1
0.0353 0.5761 0.5761
0.0143 0.3221 0.3147
0.0224 0.3826 0.3809
0.0095 0.5 0.5
0.0171 0.5742 0.5687
0.0138 0.4448 0.4448
0.0111 1 1
0.0219 1 1
0.0219 1 1
0.0018 0.3365 0.3751
0.0271 1 1
0.0171 0.5742 0.5687
0.0176 0.7425 1
0.0219 1 1
0.0171 0.5742 0.5687
0.0671 1 1
0.0093 1 1
0.0146 0.6701 0.5891
0.0214 0.991 0.991
0.0079 0.5 0.5
0.0139 0.3178 0.3178
0.0113 0.5252 0.5
0.015 1 1
0.0116 1 1

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier EmuJ_000426500 (Echinococcus multilocularis), protein MICAL 3
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