Detailed information for compound 1579157

Basic information

Technical information
  • TDR Targets ID: 1579157
  • Name: 6-[(7S)-7-hydroxy-5,6-dihydropyrrolo[2,1-e]im idazol-7-yl]-N-methylnaphthalene-2-carboxamid e
  • MW: 307.346 | Formula: C18H17N3O2
  • H donors: 2 H acceptors: 3 LogP: 1.27 Rotable bonds: 3
    Rule of 5 violations (Lipinski): 1
  • SMILES: CNC(=O)c1ccc2c(c1)ccc(c2)[C@@]1(O)CCn2c1cnc2
  • InChi: 1S/C18H17N3O2/c1-19-17(22)14-3-2-13-9-15(5-4-12(13)8-14)18(23)6-7-21-11-20-10-16(18)21/h2-5,8-11,23H,6-7H2,1H3,(H,19,22)/t18-/m0/s1
  • InChiKey: OZPFIJIOIVJZMN-SFHVURJKSA-N  

Network

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Synonyms

  • 6-[(7S)-7-hydroxy-5,6-dihydropyrrolo[2,1-e]imidazol-7-yl]-N-methyl-naphthalene-2-carboxamide
  • 6-[(7S)-7-hydroxy-5,6-dihydropyrrolo[2,1-e]imidazol-7-yl]-N-methyl-2-naphthalenecarboxamide
  • 6-[(7S)-7-hydroxy-5,6-dihydropyrrolo[2,1-e]imidazol-7-yl]-N-methyl-2-naphthamide

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens cytochrome P450, family 17, subfamily A, polypeptide 1 Starlite/ChEMBL References
Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 19 Starlite/ChEMBL References
Homo sapiens cytochrome P450, family 3, subfamily A, polypeptide 4 Starlite/ChEMBL References
Rattus norvegicus Cytochrome P450 17A1 Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Candida albicans closely related to C.maltosa N-alkane-inducible cytochrome P-450, alkane hydroxylating monooxygenase CYP52A3-b aka P450Alk1A (BA Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) cytochrome P450 family protein Get druggable targets OG5_126554 All targets in OG5_126554
Candida albicans similar to C.maltosa N-alkane inducible cytochrome P-450, ALK8 CYP52A11 Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma brucei cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania mexicana cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma cruzi cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) cytochrome P450 family protein Get druggable targets OG5_126554 All targets in OG5_126554
Candida albicans similar to C.maltosa N-alkane inducible cytochrome P-450, ALK8 CYP52A11 Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma brucei gambiense cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) CYP4Cod1 Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) cytochrome P450 family protein Get druggable targets OG5_126582 All targets in OG5_126582
Leishmania braziliensis cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania donovani cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Brugia malayi Cytochrome P450 family protein Get druggable targets OG5_126582 All targets in OG5_126582
Candida albicans cytochrome P450 56 Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania major cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania infantum cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Mycobacterium ulcerans cytochrome P450 185A4 Cyp185A4 Get druggable targets OG5_126554 All targets in OG5_126554
Brugia malayi Cytochrome P450 family protein Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma cruzi cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Brugia malayi Cytochrome P450 family protein Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma congolense cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Candida albicans cytochrome P450 556 Get druggable targets OG5_126554 All targets in OG5_126554

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 413 aa 24.5 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 424 aa 24.3 %
Onchocerca volvulus Cytochrome P450 17A1   507 aa 453 aa 24.1 %
Drosophila melanogaster CG1829 gene product from transcript CG1829-RB Cytochrome P450 17A1   507 aa 476 aa 22.3 %
Brugia malayi Cytochrome P450 family protein Cytochrome P450 17A1   507 aa 434 aa 25.6 %
Leishmania major cytochrome p450-like protein cytochrome P450, family 2, subfamily C, polypeptide 19 490 aa 411 aa 23.1 %
Drosophila melanogaster shadow Cytochrome P450 17A1   507 aa 470 aa 23.0 %
Brugia malayi Cytochrome P450 family protein cytochrome P450, family 17, subfamily A, polypeptide 1 508 aa 468 aa 25.2 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 502 aa 25.5 %
Trypanosoma cruzi cytochrome P450, putative Cytochrome P450 17A1   507 aa 428 aa 22.9 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 532 aa 25.4 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 502 aa 23.1 %
Brugia malayi cytochrome P450 cytochrome P450, family 3, subfamily A, polypeptide 4 502 aa 492 aa 24.2 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 518 aa 24.7 %
Candida albicans cytochrome P450 similar to phenylacetate hydroxylase Cytochrome P450 17A1   507 aa 510 aa 19.6 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 485 aa 24.3 %
Drosophila melanogaster CG7241 gene product from transcript CG7241-RA Cytochrome P450 17A1   507 aa 477 aa 27.9 %
Drosophila melanogaster Cytochrome P450-4d1 Cytochrome P450 17A1   507 aa 465 aa 24.1 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 423 aa 22.9 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 490 aa 20.4 %
Dictyostelium discoideum cytochrome P450 family protein Cytochrome P450 17A1   507 aa 502 aa 22.5 %
Trypanosoma cruzi cytochrome P450, putative Cytochrome P450 17A1   507 aa 428 aa 22.7 %
Candida albicans cytochrome P450 similar to phenylacetate hydroxylase Cytochrome P450 17A1   507 aa 510 aa 19.6 %
Loa Loa (eye worm) cytochrome P450 family protein Cytochrome P450 17A1   507 aa 454 aa 25.3 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Loa Loa (eye worm) hypothetical protein 0.0037 0.0415 0.0491
Loa Loa (eye worm) hypothetical protein 0.0037 0.0415 0.0491
Echinococcus granulosus carboxylesterase 5A 0.022 0.8442 1
Loa Loa (eye worm) carboxylesterase 0.022 0.8442 1
Brugia malayi Carboxylesterase family protein 0.0037 0.0415 0.0491
Schistosoma mansoni family S9 non-peptidase homologue (S09 family) 0.022 0.8442 1
Loa Loa (eye worm) carboxylesterase 0.0037 0.0415 0.0491
Echinococcus granulosus acetylcholinesterase 0.022 0.8442 1
Echinococcus multilocularis Squalene phytoene synthase 0.0079 0.2279 0.2323
Trypanosoma cruzi squalene synthase, putative 0.0255 1 1
Echinococcus multilocularis acetylcholinesterase 0.022 0.8442 1
Leishmania major hypothetical protein, conserved 0.0079 0.2279 0.2279
Trypanosoma cruzi squalene synthase, putative 0.0255 1 1
Schistosoma mansoni hypothetical protein 0.0079 0.2279 0.2323
Loa Loa (eye worm) hypothetical protein 0.0037 0.0415 0.0491
Loa Loa (eye worm) hypothetical protein 0.022 0.8442 1
Brugia malayi Carboxylesterase family protein 0.0037 0.0415 0.0491
Echinococcus multilocularis acetylcholinesterase 0.022 0.8442 1
Echinococcus granulosus acetylcholinesterase 0.022 0.8442 1
Loa Loa (eye worm) hypothetical protein 0.0037 0.0415 0.0491
Brugia malayi Cytochrome P450 family protein 0.004 0.0548 0.0649
Brugia malayi Carboxylesterase family protein 0.0037 0.0415 0.0491
Trypanosoma cruzi phytoene synthase, putative 0.0079 0.2279 0.2279
Mycobacterium ulcerans phytoene synthase, CrtB 0.0079 0.2279 1
Echinococcus granulosus Squalene phytoene synthase 0.0079 0.2279 0.2323
Loa Loa (eye worm) hypothetical protein 0.0079 0.2279 0.27
Loa Loa (eye worm) hypothetical protein 0.0037 0.0415 0.0491
Brugia malayi Carboxylesterase family protein 0.022 0.8442 1
Brugia malayi Carboxylesterase family protein 0.0037 0.0415 0.0491
Onchocerca volvulus NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog 0.0079 0.2279 1
Loa Loa (eye worm) hypothetical protein 0.022 0.8442 1
Mycobacterium tuberculosis Probable phytoene synthase PhyA 0.0079 0.2279 1
Mycobacterium ulcerans carboxylesterase, LipT 0.0037 0.0415 0.182
Loa Loa (eye worm) hypothetical protein 0.0037 0.0415 0.0491
Loa Loa (eye worm) acetylcholinesterase 1 0.022 0.8442 1
Trypanosoma brucei squalene synthase, putative 0.0255 1 1
Loa Loa (eye worm) carboxylesterase 0.0037 0.0415 0.0491
Trichomonas vaginalis spcc417.12 protein, putative 0.0037 0.0415 0.5
Loa Loa (eye worm) cytochrome P450 family protein 0.004 0.0548 0.0649
Brugia malayi Carboxylesterase family protein 0.022 0.8442 1
Loa Loa (eye worm) hypothetical protein 0.0037 0.0415 0.0491
Trichomonas vaginalis carboxylesterase domain containing protein, putative 0.0037 0.0415 0.5
Brugia malayi hypothetical protein 0.0037 0.0415 0.0491
Echinococcus multilocularis carboxylesterase 5A 0.022 0.8442 1

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) = 19 nM Inhibition of 17,20-lyase of recombinant human CYP17A1 using [1,2-3H]-17a-hydroxypregnenolone as substrate after 15 mins by TLC analysis ChEMBL. 21978946
IC50 (binding) = 48 nM Inhibition of 17,20-lyase activity of Sprague-Dawley rat testicular microsomal CYP17A1 using [1,2-3H]-17a-hydroxyprogesterone as substrate after 15 mins by TLC analysis ChEMBL. 21978946
IC50 (ADMET) > 10000 nM Inhibition of recombinant human CYP3A4 assessed as conversion of testosterone into 6-hydroxytestosterone after 30 mins by HPLC analysis ChEMBL. 21978946
IC50 (ADMET) = 14000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP2C19 assessed as (S)-mephenytoin 4'-hydroxylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) = 28000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP1A2 assessed as 7-ethoxyresorufin O-deethylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) > 30000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP2A6 assessed as coumarin 7-hydroxylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) > 30000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP2B6 assessed as ethoxycoumarin O-deethylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) > 30000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP2C8 assessed as Tolbutamide hydroxylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) > 30000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP2C9 (Arg) assessed as Tolbutamide hydroxylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) > 30000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP2C9 (Cys) assessed as Tolbutamide hydroxylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) > 30000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP2D6 assessed as (+)-bufuralol 1'-hydroxylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) > 30000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP2E1 assessed as 4-nitrophenol hydroxylation preincubated for 5 mins with substrate ChEMBL. 21978946
IC50 (ADMET) > 30000 nM Inhibition of human B-lymphoblastoid cell microsomal CYP3A4 assessed as testosterone 6beta-hydroxylation preincubated for 5 mins with substrate ChEMBL. 21978946

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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