Detailed information for compound 1587742

Basic information

Technical information
  • TDR Targets ID: 1587742
  • Name: 2,6-dimethoxy-N-[2-(pyrrolidine-1-carbonyl)ph enyl]benzamide
  • MW: 354.4 | Formula: C20H22N2O4
  • H donors: 1 H acceptors: 2 LogP: 3.2 Rotable bonds: 7
    Rule of 5 violations (Lipinski): 1
  • SMILES: COc1cccc(c1C(=O)Nc1ccccc1C(=O)N1CCCC1)OC
  • InChi: 1S/C20H22N2O4/c1-25-16-10-7-11-17(26-2)18(16)19(23)21-15-9-4-3-8-14(15)20(24)22-12-5-6-13-22/h3-4,7-11H,5-6,12-13H2,1-2H3,(H,21,23)
  • InChiKey: KFGPSOHQDUMYEF-UHFFFAOYSA-N  


Substructure search Similarity search

Network

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Synonyms

  • 2,6-dimethoxy-N-[2-(oxo-1-pyrrolidinylmethyl)phenyl]benzamide
  • 2,6-dimethoxy-N-(2-pyrrolidin-1-ylcarbonylphenyl)benzamide
  • ZINC04733037
  • ST5436626

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens SMAD family member 2 Starlite/ChEMBL No references
Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1 Starlite/ChEMBL No references

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Trypanosoma congolense apurinic/apyrimidinic endonuclease, putative Get druggable targets OG5_126768 All targets in OG5_126768
Mycobacterium ulcerans exodeoxyribonuclease III protein XthA Get druggable targets OG5_126768 All targets in OG5_126768
Wolbachia endosymbiont of Brugia malayi exonuclease III Get druggable targets OG5_126768 All targets in OG5_126768
Schistosoma japonicum ko:K10772 AP endonuclease 2, putative Get druggable targets OG5_126768 All targets in OG5_126768
Trypanosoma brucei gambiense apurinic/apyrimidinic endonuclease, putative Get druggable targets OG5_126768 All targets in OG5_126768
Echinococcus multilocularis DNA (apurinic or apyrimidinic site) lyase Get druggable targets OG5_126768 All targets in OG5_126768
Plasmodium vivax AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative Get druggable targets OG5_126768 All targets in OG5_126768
Loa Loa (eye worm) MH2 domain-containing protein Get druggable targets OG5_131716 All targets in OG5_131716
Mycobacterium tuberculosis Probable exodeoxyribonuclease III protein XthA (exonuclease III) (EXO III) (AP endonuclease VI) Get druggable targets OG5_126768 All targets in OG5_126768
Cryptosporidium parvum conserved hypothetical protein Get druggable targets OG5_126768 All targets in OG5_126768
Candida albicans similar to S. cerevisiae APN2 (YBL019W) DNA repair apurinic/apyrimidinic endonuclease Get druggable targets OG5_126768 All targets in OG5_126768
Leishmania infantum apurinic/apyrimidinic endonuclease-redox protein Get druggable targets OG5_126768 All targets in OG5_126768
Leishmania braziliensis apurinic/apyrimidinic endonuclease-redox protein Get druggable targets OG5_126768 All targets in OG5_126768
Loa Loa (eye worm) exodeoxyribonuclease III family protein Get druggable targets OG5_126768 All targets in OG5_126768
Leishmania mexicana apurinic/apyrimidinic endonuclease-redox protein,AP-endonuclease Get druggable targets OG5_126768 All targets in OG5_126768
Schistosoma japonicum DNA-(apurinic or apyrimidinic site) lyase 2, putative Get druggable targets OG5_126768 All targets in OG5_126768
Echinococcus granulosus DNA apurinic or apyrimidinic site lyase Get druggable targets OG5_126768 All targets in OG5_126768
Neospora caninum hypothetical protein Get druggable targets OG5_126768 All targets in OG5_126768
Schistosoma japonicum DNA-(apurinic or apyrimidinic site) lyase 2, putative Get druggable targets OG5_126768 All targets in OG5_126768
Theileria parva hypothetical protein Get druggable targets OG5_126768 All targets in OG5_126768
Trypanosoma brucei apurinic/apyrimidinic endonuclease, putative Get druggable targets OG5_126768 All targets in OG5_126768
Leishmania donovani apurinic/apyrimidinic endonuclease-redox protein Get druggable targets OG5_126768 All targets in OG5_126768
Loa Loa (eye worm) transcription factor SMAD2 Get druggable targets OG5_131716 All targets in OG5_131716
Giardia lamblia Endonuclease/Exonuclease/phosphatase Get druggable targets OG5_126768 All targets in OG5_126768
Cryptosporidium hominis dna-(apurinic or apyrimidinic site) lyase Get druggable targets OG5_126768 All targets in OG5_126768
Trichomonas vaginalis ap endonuclease, putative Get druggable targets OG5_126768 All targets in OG5_126768
Trypanosoma cruzi apurinic/apyrimidinic endonuclease Get druggable targets OG5_126768 All targets in OG5_126768
Trichomonas vaginalis ap endonuclease, putative Get druggable targets OG5_126768 All targets in OG5_126768
Plasmodium falciparum AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative Get druggable targets OG5_126768 All targets in OG5_126768
Entamoeba histolytica exodeoxyribonuclease III, putative Get druggable targets OG5_126768 All targets in OG5_126768
Schistosoma mansoni ap endonuclease Get druggable targets OG5_126768 All targets in OG5_126768
Brugia malayi exodeoxyribonuclease III family protein Get druggable targets OG5_126768 All targets in OG5_126768
Trypanosoma cruzi apurinic/apyrimidinic endonuclease, putative Get druggable targets OG5_126768 All targets in OG5_126768
Plasmodium berghei AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative Get druggable targets OG5_126768 All targets in OG5_126768
Plasmodium knowlesi AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative Get druggable targets OG5_126768 All targets in OG5_126768
Schistosoma mansoni ap endonuclease Get druggable targets OG5_126768 All targets in OG5_126768
Brugia malayi MH2 domain containing protein Get druggable targets OG5_131716 All targets in OG5_131716
Schistosoma japonicum ko:K10771 AP endonuclease 1, putative Get druggable targets OG5_126768 All targets in OG5_126768
Treponema pallidum exodeoxyribonuclease (exoA) Get druggable targets OG5_126768 All targets in OG5_126768
Candida albicans similar to S. cerevisiae APN2 (YBL019W) DNA repair apurinic/apyrimidinic endonuclease Get druggable targets OG5_126768 All targets in OG5_126768
Leishmania major apurinic/apyrimidinic endonuclease-redox protein Get druggable targets OG5_126768 All targets in OG5_126768
Plasmodium yoelii putative AP endonuclease-related Get druggable targets OG5_126768 All targets in OG5_126768
Toxoplasma gondii exonuclease III APE Get druggable targets OG5_126768 All targets in OG5_126768
By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Brugia malayi MH2 domain containing protein SMAD family member 2 467 aa 405 aa 31.6 %
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Mycobacterium tuberculosis Possible oxidoreductase 0.0192 0.1689 1
Toxoplasma gondii SWIRM domain-containing protein 0.008 0.0571 0.338
Schistosoma mansoni SWI/SNF complex-related 0.008 0.0571 0.062
Plasmodium vivax lysine-specific histone demethylase 1, putative 0.0192 0.1689 1
Loa Loa (eye worm) hypothetical protein 0.1024 1 1
Trypanosoma cruzi UDP-galactopyranose mutase 0.0192 0.1689 1
Echinococcus granulosus SWI:SNF complex subunit SMARCC2 0.008 0.0571 0.062
Schistosoma mansoni amine oxidase 0.0192 0.1689 0.1836
Loa Loa (eye worm) hypothetical protein 0.0944 0.9202 0.9202
Loa Loa (eye worm) hypothetical protein 0.0192 0.1689 0.1689
Plasmodium falciparum lysine-specific histone demethylase 1, putative 0.0192 0.1689 1
Brugia malayi SWIRM domain containing protein 0.008 0.0571 0.0571
Onchocerca volvulus 0.1024 1 0.5
Mycobacterium ulcerans flavin-containing monoamine oxidase AofH 0.0192 0.1689 1
Loa Loa (eye worm) transcription factor SMAD2 0.0144 0.1213 0.1213
Loa Loa (eye worm) hypothetical protein 0.008 0.0571 0.0571
Mycobacterium ulcerans flavin-containing monoamine oxidase AofH 0.0192 0.1689 1
Brugia malayi amine oxidase, flavin-containing family protein 0.0272 0.2487 0.2487
Plasmodium falciparum protoporphyrinogen oxidase 0.0192 0.1689 1
Mycobacterium ulcerans monoamine oxidase 0.0192 0.1689 1
Brugia malayi hypothetical protein 0.0192 0.1689 0.1689
Plasmodium vivax protoporphyrinogen oxidase, putative 0.0192 0.1689 1
Trichomonas vaginalis conserved hypothetical protein 0.008 0.0571 1
Brugia malayi MH2 domain containing protein 0.0144 0.1213 0.1213
Echinococcus multilocularis lysine specific histone demethylase 1A 0.0944 0.9202 1
Chlamydia trachomatis protoporphyrinogen oxidase 0.0192 0.1689 0.5
Giardia lamblia hypothetical protein 0.008 0.0571 1
Mycobacterium tuberculosis Conserved hypothetical protein 0.0192 0.1689 1
Trypanosoma brucei apurinic/apyrimidinic endonuclease, putative 0.0023 0 0.5
Wolbachia endosymbiont of Brugia malayi exonuclease III 0.0023 0 0.5
Entamoeba histolytica SWIRM domain protein 0.008 0.0571 1
Mycobacterium ulcerans dehydrogenase 0.0192 0.1689 1
Mycobacterium leprae PROBABLE PROTOPORPHYRINOGEN OXIDASE HEMY (PROTOPORPHYRINOGEN-IX OXIDASE) (PROTOPORPHYRINOGENASE) (PPO) 0.0192 0.1689 0.5
Echinococcus granulosus lysine specific histone demethylase 1A 0.0192 0.1689 0.1836
Treponema pallidum exodeoxyribonuclease (exoA) 0.0023 0 0.5
Leishmania major UDP-galactopyranose mutase 0.0192 0.1689 1
Plasmodium vivax hypothetical protein, conserved 0.0192 0.1689 1
Schistosoma mansoni Lysine-specific histone demethylase 1 0.0944 0.9202 1
Echinococcus multilocularis protoporphyrinogen oxidase 0.0192 0.1689 0.1836
Mycobacterium ulcerans oxidoreductase 0.0192 0.1689 1
Toxoplasma gondii histone lysine-specific demethylase LSD1/BHC110/KDMA1A 0.0192 0.1689 1
Loa Loa (eye worm) hypothetical protein 0.0944 0.9202 0.9202
Entamoeba histolytica hypothetical protein 0.008 0.0571 1
Loa Loa (eye worm) hypothetical protein 0.0192 0.1689 0.1689
Plasmodium vivax hypothetical protein, conserved 0.0192 0.1689 1
Mycobacterium ulcerans protoporphyrinogen oxidase 0.0192 0.1689 1
Echinococcus multilocularis 0.0192 0.1689 0.1836
Echinococcus granulosus lysine specific histone demethylase 1A 0.0944 0.9202 1
Toxoplasma gondii histone lysine-specific demethylase 0.0192 0.1689 1
Echinococcus multilocularis SWI:SNF complex subunit SMARCC2 0.008 0.0571 0.062
Schistosoma mansoni Protoporphyrinogen oxidase chloroplast/mitochondrial precursor 0.0192 0.1689 0.1836
Entamoeba histolytica SWIRM domain protein 0.008 0.0571 1
Loa Loa (eye worm) hypothetical protein 0.0272 0.2487 0.2487
Plasmodium falciparum conserved Plasmodium protein, unknown function 0.0192 0.1689 1
Trichomonas vaginalis conserved hypothetical protein 0.008 0.0571 1
Schistosoma mansoni amine oxidase 0.0192 0.1689 0.1836
Loa Loa (eye worm) MH2 domain-containing protein 0.0144 0.1213 0.1213
Trypanosoma cruzi UDP-galactopyranose mutase 0.0192 0.1689 1

Activities

Activity type Activity value Assay description Source Reference
Potency (functional) 0.2239 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of TGF-b: Cytotox Counterscreen. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588855, AID588860] ChEMBL. No reference
Potency (functional) 6.3096 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of TGF-b. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588856, AID588860] ChEMBL. No reference
Potency (functional) 8.4368 uM PubChem BioAssay. qHTS Assay for Inhibitors of the Human Apurinic/apyrimidinic Endonuclease 1 (APE1). (Class of assay: confirmatory) ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

Species name Source Reference Is orphan
Homo sapiens ChEMBL23

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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