TDR Targets

Basic information

Technical information

TDR Targets ID: 1231846
Name: 1-Methylphenazine
MW: 194.232 | Formula: C13H10N2
H donors: 0 H acceptors: 2 LogP: 3 Rotable bonds: 0
Rule of 5 violations (Lipinski): 1
SMILES: Cc1cccc2c1nc1ccccc1n2
InChi: 1S/C13H10N2/c1-9-5-4-8-12-13(9)15-11-7-3-2-6-10(11)14-12/h2-8H,1H3
InChiKey: WBVSERCLMQZOBK-UHFFFAOYSA-N

Network

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Target Layer

Model Organisms

Species	Viewmode
Arabidopsis thaliana
Caenorhabditis elegans
Dictyostelium discoideum
Drosophila melanogaster
Escherichia coli
Homo sapiens
Mus musculus
Oryza sativa
Saccharomyces cerevisiae
Schmidtea mediterranea
Other organisms

TDR Pathogens:

Species	Viewmode
Brugia malayi
Chlamydia trachomatis
Echinococcus granulosus
Entamoeba histolytica
Echinococcus multilocularis
Giardia lamblia
Leishmania major
Loa Loa (eye worm)
Mycobacterium leprae
Mycobacterium tuberculosis
Mycobacterium ulcerans
Onchocerca volvulus
Plasmodium falciparum
Plasmodium vivax
Schistosoma mansoni
Trypanosoma brucei
Trypanosoma cruzi
Toxoplasma gondii
Treponema pallidum
Trichomonas vaginalis
Wolbachia endosymbiont of Brugia malayi

Other Pathogens:

Species	Viewmode
Babesia bovis
Candida albicans
Cryptosporidium hominis
Cryptosporidium parvum
Leishmania braziliensis
Leishmania donovani
Leishmania infantum
Leishmania mexicana
Neospora caninum
Plasmodium berghei
Plasmodium knowlesi
Plasmodium yoelii
Schistosoma japonicum
Trypanosoma brucei gambiense
Trypanosoma congolense
Theileria parva

Compound Layer

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Clustering layers

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Synonyms

ZINC04186663
Phenazine, 1-methyl-
AF-407/09202012
MLS001005718
SMR000348973

Targets

Known targets for this compound

Species	Target name	Source	Bibliographic reference
Homo sapiens	muscleblind-like splicing regulator 1	Starlite/ChEMBL	No references
Escherichia coli	penicillin-binding protein	Starlite/ChEMBL	No references
Homo sapiens	TAR DNA binding protein	Starlite/ChEMBL	No references
Human immunodeficiency virus 1	Aberrant vpr protein	Starlite/ChEMBL	No references

Predicted pathogen targets for this compound

By orthology

Species	Potential target	Known druggable target/s	Ortholog Group
Loa Loa (eye worm)	hypothetical protein	Get druggable targets OG5_132352	All targets in OG5_132352
Brugia malayi	RNA recognition motif domain containing protein	Get druggable targets OG5_132461	All targets in OG5_132461
Schistosoma japonicum	TAR DNA-binding protein 43, putative	Get druggable targets OG5_132461	All targets in OG5_132461
Brugia malayi	Muscleblind-like protein	Get druggable targets OG5_132352	All targets in OG5_132352
Schistosoma mansoni	tar DNA-binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Schistosoma mansoni	tar DNA-binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Echinococcus multilocularis	tar DNA binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Mycobacterium tuberculosis	Possible penicillin-binding protein	Get druggable targets OG5_149948	All targets in OG5_149948
Loa Loa (eye worm)	RNA recognition domain-containing protein domain-containing protein	Get druggable targets OG5_132461	All targets in OG5_132461
Schistosoma mansoni	tar DNA-binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Schistosoma mansoni	tar DNA-binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Schistosoma japonicum	TAR DNA-binding protein 43, putative	Get druggable targets OG5_132461	All targets in OG5_132461
Loa Loa (eye worm)	RNA binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Echinococcus granulosus	muscleblind protein	Get druggable targets OG5_132352	All targets in OG5_132352
Loa Loa (eye worm)	TAR-binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Schistosoma mansoni	tar DNA-binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Loa Loa (eye worm)	hypothetical protein	Get druggable targets OG5_132352	All targets in OG5_132352
Echinococcus multilocularis	muscleblind protein	Get druggable targets OG5_132352	All targets in OG5_132352
Brugia malayi	TAR-binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Brugia malayi	RNA binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Echinococcus granulosus	tar DNA binding protein	Get druggable targets OG5_132461	All targets in OG5_132461
Echinococcus multilocularis	muscleblind protein 1	Get druggable targets OG5_132352	All targets in OG5_132352

By sequence similarity to non orthologous known druggable targets

No druggable targets predicted by sequence similarity

Ranking Plot

Putative Targets List

Species	Potential target	Raw	Global	Species
Loa Loa (eye worm)	beta-lactamase	0.0043	0.0094	0.016
Trichomonas vaginalis	D-aminoacylase, putative	0.0043	0.0094	0.094
Onchocerca volvulus		0.0043	0.0094	0.1245
Plasmodium falciparum	cysteine proteinase falcipain 3	0.0059	0.0757	0.5
Brugia malayi	RNA recognition motif domain containing protein	0.0076	0.149	0.2533
Echinococcus granulosus	cathepsin l1	0.0059	0.0757	0.1287
Onchocerca volvulus		0.0059	0.0757	1
Leishmania major	cathepsin L-like protease	0.0059	0.0757	0.7297
Brugia malayi	Papain family cysteine protease containing protein	0.0059	0.0757	0.1287
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Schistosoma mansoni	tar DNA-binding protein	0.0076	0.149	0.2605
Mycobacterium ulcerans	hypothetical protein	0.0043	0.0094	0.5
Trypanosoma cruzi	hypothetical protein, conserved	0.0043	0.0094	0.0165
Loa Loa (eye worm)	cathepsin B	0.0065	0.1002	0.1704
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Onchocerca volvulus		0.0059	0.0757	1
Echinococcus multilocularis	cathepsin l cysteine peptidase	0.0059	0.0757	0.1145
Loa Loa (eye worm)	papain family cysteine protease containing protein	0.0059	0.0757	0.1287
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Brugia malayi	beta-lactamase	0.0043	0.0094	0.016
Brugia malayi	Muscleblind-like protein	0.018	0.5883	1
Trichomonas vaginalis	Clan CA, family C1, cathepsin L or K-like cysteine peptidase	0.0059	0.0757	0.7551
Loa Loa (eye worm)	hypothetical protein	0.018	0.5883	1
Brugia malayi	RNA binding protein	0.0076	0.149	0.2533
Schistosoma mansoni	SmCB2 peptidase (C01 family)	0.0177	0.5721	1
Schistosoma mansoni	cathepsin F (C01 family)	0.0059	0.0757	0.1323
Plasmodium falciparum	cysteine proteinase falcipain 2b	0.0059	0.0757	0.5
Trypanosoma cruzi	cysteine peptidase C (CPC), putative	0.0065	0.1002	0.1752
Entamoeba histolytica	cysteine proteinase, putative	0.0059	0.0757	1
Schistosoma mansoni	tar DNA-binding protein	0.0076	0.149	0.2605
Onchocerca volvulus		0.0059	0.0757	1
Trypanosoma cruzi	cruzipain precursor, putative	0.0059	0.0757	0.1323
Mycobacterium leprae	Probable lipase LipE	0.0043	0.0094	0.5
Loa Loa (eye worm)	beta-LACTamase domain containing family member	0.0043	0.0094	0.016
Brugia malayi	beta-lactamase family protein	0.0043	0.0094	0.016
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Loa Loa (eye worm)	TAR-binding protein	0.0076	0.149	0.2533
Loa Loa (eye worm)	hypothetical protein	0.018	0.5883	1
Schistosoma mansoni	family S12 unassigned peptidase (S12 family)	0.0043	0.0094	0.0165
Echinococcus granulosus	muscleblind protein	0.018	0.5883	1
Echinococcus granulosus	beta LACTamase domain containing family member	0.0043	0.0094	0.016
Mycobacterium ulcerans	lipase LipD	0.0043	0.0094	0.5
Mycobacterium ulcerans	esterase/lipase LipP	0.0043	0.0094	0.5
Trypanosoma cruzi	cysteine peptidase, putative	0.0059	0.0757	0.1323
Loa Loa (eye worm)	RNA binding protein	0.0076	0.149	0.2533
Onchocerca volvulus	Cathepsin L homolog	0.0059	0.0757	1
Toxoplasma gondii	cathepsin CPL	0.0059	0.0757	0.7297
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Brugia malayi	Cathepsin L-like precursor	0.0059	0.0757	0.1287
Plasmodium vivax	vivapain-2	0.0059	0.0757	1
Leishmania major	cathepsin L-like protease	0.0059	0.0757	0.7297
Echinococcus granulosus	cathepsin b	0.0177	0.5721	0.9725
Giardia lamblia	Cathepsin B precursor	0.0065	0.1002	0.5
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Loa Loa (eye worm)	hypothetical protein	0.0059	0.0757	0.1287
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Giardia lamblia	Cathepsin B precursor	0.0065	0.1002	0.5
Loa Loa (eye worm)	ctsf protein	0.0059	0.0757	0.1287
Echinococcus multilocularis	cysteine protease	0.0059	0.0757	0.1145
Brugia malayi	Cathepsin L-like precursor	0.0059	0.0757	0.1287
Giardia lamblia	Cathepsin B precursor	0.0065	0.1002	0.5
Schistosoma mansoni	cathepsin F (C01 family)	0.0059	0.0757	0.1323
Echinococcus granulosus	cathepsin l cysteine peptidase	0.0059	0.0757	0.1287
Schistosoma mansoni	tar DNA-binding protein	0.0076	0.149	0.2605
Echinococcus multilocularis	tar DNA binding protein	0.0076	0.149	0.2412
Plasmodium vivax	vivapain-2	0.0059	0.0757	1
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Leishmania major	cysteine peptidase C (CPC),CPC cysteine peptidase, Clan CA, family C1, Cathepsin B-like	0.0065	0.1002	1
Onchocerca volvulus		0.0059	0.0757	1
Trypanosoma brucei	cysteine peptidase C (CPC)	0.0065	0.1002	1
Leishmania major	cathepsin L-like protease	0.0059	0.0757	0.7297
Leishmania major	cathepsin L-like protease	0.0059	0.0757	0.7297
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Echinococcus multilocularis	cathepsin l cysteine peptidase	0.0059	0.0757	0.1145
Trypanosoma cruzi	cysteine peptidase, putative	0.0059	0.0757	0.1323
Loa Loa (eye worm)	Papain cysteine protease/cathepsin propeptide inhibitor-containing protein	0.0059	0.0757	0.1287
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Brugia malayi	Cathepsin L-like precursor	0.0059	0.0757	0.1287
Mycobacterium ulcerans	beta-lactamase	0.0043	0.0094	0.5
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Loa Loa (eye worm)	cysteine protease	0.0059	0.0757	0.1287
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Mycobacterium leprae	conserved hypothetical protein	0.0043	0.0094	0.5
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Trichomonas vaginalis	D-aminoacylase, putative	0.0043	0.0094	0.094
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Trichomonas vaginalis	penicillin-binding protein, putative	0.0043	0.0094	0.094
Onchocerca volvulus	Cathepsin L homolog	0.0059	0.0757	1
Schistosoma mansoni	cathepsin B-like peptidase (C01 family)	0.0177	0.5721	1
Onchocerca volvulus	Cathepsin F homolog	0.0059	0.0757	1
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Echinococcus multilocularis	muscleblind protein	0.018	0.5883	1
Trichomonas vaginalis	esterase, putative	0.0043	0.0094	0.094
Echinococcus granulosus	tar DNA binding protein	0.0076	0.149	0.2533
Trypanosoma cruzi	cysteine peptidase, putative	0.0059	0.0757	0.1323
Loa Loa (eye worm)	hypothetical protein	0.0043	0.0094	0.016
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Leishmania major	cathepsin L-like protease	0.0059	0.0757	0.7297
Loa Loa (eye worm)	hypothetical protein	0.0177	0.5721	0.9725
Brugia malayi	Cathepsin L-like precursor	0.0059	0.0757	0.1287
Schistosoma mansoni	cathepsin B-like peptidase (C01 family)	0.0065	0.1002	0.1752
Brugia malayi	TAR-binding protein	0.0076	0.149	0.2533
Trichomonas vaginalis	penicillin-binding protein, putative	0.0043	0.0094	0.094
Echinococcus multilocularis	cathepsin L cysteine protease	0.0059	0.0757	0.1145
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Loa Loa (eye worm)	hypothetical protein	0.0043	0.0094	0.016
Leishmania major	cathepsin L-like protease	0.0059	0.0757	0.7297
Trypanosoma cruzi	cysteine peptidase C (CPC), putative	0.0177	0.5721	1
Onchocerca volvulus		0.0043	0.0094	0.1245
Schistosoma mansoni	cathepsin B-like peptidase (C01 family)	0.0177	0.5721	1
Brugia malayi	Cathepsin L-like precursor	0.0059	0.0757	0.1287
Echinococcus multilocularis	muscleblind protein 1	0.018	0.5883	1
Mycobacterium ulcerans	fusion of enoyl-CoA hydratase, EchA21 and lipase, LipE	0.0043	0.0094	0.5
Entamoeba histolytica	cysteine protease, putative	0.0059	0.0757	1
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Echinococcus granulosus	cathepsin b	0.0177	0.5721	0.9725
Loa Loa (eye worm)	hypothetical protein	0.0043	0.0094	0.016
Schistosoma mansoni	tar DNA-binding protein	0.0076	0.149	0.2605
Loa Loa (eye worm)	hypothetical protein	0.0043	0.0094	0.016
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Schistosoma mansoni	tar DNA-binding protein	0.0076	0.149	0.2605
Entamoeba histolytica	cysteine proteinase, putative	0.0059	0.0757	1
Brugia malayi	cathepsin B-like cysteine proteinase	0.0177	0.5721	0.9725
Leishmania major	cysteine peptidase A (CPA)	0.0059	0.0757	0.7297
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Loa Loa (eye worm)	hypothetical protein	0.0043	0.0094	0.016
Onchocerca volvulus		0.0059	0.0757	1
Trypanosoma cruzi	cysteine peptidase, putative	0.0059	0.0757	0.1323
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Trichomonas vaginalis	Clan CA, family C1, cathepsin L or K-like cysteine peptidase	0.0059	0.0757	0.7551
Echinococcus multilocularis	cathepsin L cysteine protease	0.0059	0.0757	0.1145
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Plasmodium falciparum	cysteine proteinase falcipain 2a	0.0059	0.0757	0.5
Trichomonas vaginalis	Clan CA, family C1, cathepsin L-like cysteine peptidase	0.0059	0.0757	0.7551
Toxoplasma gondii	cathepsin B	0.0065	0.1002	1
Trichomonas vaginalis	Clan CA, family C1, cathepsin B-like cysteine peptidase	0.0065	0.1002	1
Brugia malayi	Hypothetical 52.5 kDa protein ZK945.1 in chromosome II, putative	0.0043	0.0094	0.016
Trichomonas vaginalis	D-aminoacylase, putative	0.0043	0.0094	0.094
Echinococcus multilocularis	cathepsin b	0.0177	0.5721	0.972
Schistosoma mansoni	cathepsin B-like peptidase (C01 family)	0.0177	0.5721	1
Leishmania major	cathepsin L-like protease	0.0059	0.0757	0.7297
Brugia malayi	beta-lactamase family protein	0.0043	0.0094	0.016
Loa Loa (eye worm)	RNA recognition domain-containing protein domain-containing protein	0.0076	0.149	0.2533
Onchocerca volvulus		0.0059	0.0757	1
Onchocerca volvulus		0.0059	0.0757	1
Loa Loa (eye worm)	hypothetical protein	0.0043	0.0094	0.016
Trypanosoma cruzi	hypothetical protein, conserved	0.0043	0.0094	0.0165
Echinococcus granulosus	cathepsin L cysteine proteinase	0.0059	0.0757	0.1287
Echinococcus multilocularis	cathepsin b	0.0177	0.5721	0.972
Schistosoma mansoni	family S12 unassigned peptidase (S12 family)	0.0043	0.0094	0.0165
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Onchocerca volvulus		0.0043	0.0094	0.1245
Brugia malayi	Cathepsin L-like precursor	0.0059	0.0757	0.1287
Trichomonas vaginalis	Clan CA, family C1, papain-like cysteine peptidase	0.0059	0.0757	0.7551
Leishmania major	cathepsin L-like protease	0.0059	0.0757	0.7297
Echinococcus multilocularis	cysteine protease	0.0059	0.0757	0.1145
Trypanosoma brucei	cysteine peptidase, Clan CA, family C1, Cathepsin L-like	0.0059	0.0757	0.7297
Loa Loa (eye worm)	fibroinase	0.0059	0.0757	0.1287

Activities

Activity type	Activity value	Assay description	Source	Reference
Potency (functional)	= 0.7079 um	PUBCHEM_BIOASSAY: qHTS Inhibitors of AmpC Beta-Lactamase (assay with detergent). (Class of assay: confirmatory) [Related pubchem assays: 1002 (Confirmation Concentration-Response Assay for Inhibitors of AmpC Beta-Lactamase (assay with detergent)), 585 (Promiscuous and Specific Inhibitors of AmpC Beta-Lactamase (assay without detergent) - a screen old NIH MLSMR collection), 584 (Promiscuous and Specific Inhibitors of AmpC Beta-Lactamase (assay with detergent) - a screen of the old NIH MLSMR collection), 1003 (Confirmation Cuvette-Based Assay for Inhibitors of AmpC Beta-Lactamase (assay with detergent))]	ChEMBL.	No reference
Potency (functional)	6.3096 uM	PubChem BioAssay. qHTS Assay for Inhibitors of the HIV-1 protein Vpr. (Class of assay: confirmatory)	ChEMBL.	No reference
Potency (functional)	12.5893 uM	PubChem BioAssay. qHTS of TDP-43 Inhibitors. (Class of assay: confirmatory)	ChEMBL.	No reference
Potency (binding)	17.7828 uM	PubChem BioAssay. qHTS Assay for Inhibitors of MBNL1-poly(CUG) RNA binding. (Class of assay: confirmatory)	ChEMBL.	No reference
Potency (functional)	18.526 uM	PUBCHEM_BIOASSAY: Primary qHTS for delayed death inhibitors of the malarial parasite plastid, 48 hour incubation. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID488752, AID488774, AID504848, AID504850]	ChEMBL.	No reference
Potency (functional)	19.9526 uM	PUBCHEM_BIOASSAY: qHTS for Inhibitors of binding or entry into cells for Lassa Virus. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID463114, AID540249]	ChEMBL.	No reference

Phenotypes

Whole-cell/tissue/organism interactions

Species name	Source	Reference	Is orphan
Plasmodium falciparum	ChEMBL23
Homo sapiens	ChEMBL23

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

ChEMBL: CHEMBL1344088

Bibliographic References

No literature references available for this target.

If you have references for this compound, please enter them in a user comment (below) or Contact us.

Detailed information for compound 1231846