Detailed information for compound 30902

Basic information

Technical information
  • TDR Targets ID: 30902
  • Name: 3-[[2,2-difluoro-4-[[(2S)-1-[(2S)-3-methyl-2- [(2-methylpropan-2-yl)oxycarbonylamino]butano yl]pyrrolidine-2-carbonyl]amino]-3-oxo-5-phen ylpentanoyl]amino]benzoic acid
  • MW: 658.69 | Formula: C33H40F2N4O8
  • H donors: 4 H acceptors: 7 LogP: 5.26 Rotable bonds: 18
    Rule of 5 violations (Lipinski): 2
  • SMILES: O=C(OC(C)(C)C)N[C@H](C(=O)N1CCC[C@H]1C(=O)NC(C(=O)C(C(=O)Nc1cccc(c1)C(=O)O)(F)F)Cc1ccccc1)C(C)C
  • InChi: 1S/C33H40F2N4O8/c1-19(2)25(38-31(46)47-32(3,4)5)28(42)39-16-10-15-24(39)27(41)37-23(17-20-11-7-6-8-12-20)26(40)33(34,35)30(45)36-22-14-9-13-21(18-22)29(43)44/h6-9,11-14,18-19,23-25H,10,15-17H2,1-5H3,(H,36,45)(H,37,41)(H,38,46)(H,43,44)/t23?,24-,25-/m0/s1
  • InChiKey: DWKQSWOPFOFIHM-DJHGOXGWSA-N  

Network

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Synonyms

  • 3-[[4-[[(2S)-1-[(2S)-2-(tert-butoxycarbonylamino)-3-methyl-butanoyl]pyrrolidine-2-carbonyl]amino]-2,2-difluoro-3-oxo-5-phenyl-pentanoyl]amino]benzoic acid
  • 3-[[4-[[[(2S)-1-[(2S)-2-[[tert-butoxy(oxo)methyl]amino]-3-methyl-1-oxobutyl]-2-pyrrolidinyl]-oxomethyl]amino]-2,2-difluoro-1,3-dioxo-5-phenylpentyl]amino]benzoic acid
  • 3-[[2,2-difluoro-4-[[(2S)-1-[(2S)-3-methyl-2-[(2-methylpropan-2-yl)oxycarbonylamino]butanoyl]pyrrolidin-2-yl]carbonylamino]-3-oxo-5-phenyl-pentanoyl]amino]benzoic acid
  • 3-[[4-[[(2S)-1-[(2S)-2-(tert-butoxycarbonylamino)-3-methyl-butanoyl]prolyl]amino]-2,2-difluoro-3-keto-5-phenyl-pentanoyl]amino]benzoic acid
  • 3-[[4-[[[(2S)-1-[(2S)-2-[(tert-butoxy-oxomethyl)amino]-3-methyl-1-oxobutyl]-2-pyrrolidinyl]-oxomethyl]amino]-2,2-difluoro-1,3-dioxo-5-phenylpentyl]amino]benzoic acid
  • 3-[[4-[[(2S)-1-[(2S)-2-(tert-butoxycarbonylamino)-3-methyl-butanoyl]pyrrolidine-2-carbonyl]amino]-2,2-difluoro-3-keto-5-phenyl-pentanoyl]amino]benzoic acid

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Bos taurus Alpha-chymotrypsin Starlite/ChEMBL References
Homo sapiens chymotrypsin C (caldecrin) Starlite/ChEMBL References
Homo sapiens chymase 1, mast cell Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Drosophila melanogaster CG18180 gene product from transcript CG18180-RA Alpha-chymotrypsin   245 aa 232 aa 31.0 %
Echinococcus multilocularis subfamily S1A unassigned peptidase (S01 family) Alpha-chymotrypsin   245 aa 300 aa 27.7 %
Drosophila melanogaster betaTrypsin Alpha-chymotrypsin   245 aa 239 aa 40.6 %
Schistosoma mansoni aminopeptidase PILS (M01 family) Alpha-chymotrypsin   245 aa 300 aa 23.3 %
Schistosoma mansoni cercarial elastase (S01 family) Alpha-chymotrypsin   245 aa 213 aa 26.8 %
Drosophila melanogaster CG31267 gene product from transcript CG31267-RA Alpha-chymotrypsin   245 aa 235 aa 31.5 %
Schistosoma japonicum Cercarial protease precursor (EC 3.4.21.-) (Cercarial elastase), putative Alpha-chymotrypsin   245 aa 220 aa 20.9 %
Drosophila melanogaster Jonah 99Ci Alpha-chymotrypsin   245 aa 234 aa 29.5 %
Schistosoma mansoni subfamily S1A unassigned peptidase (S01 family) Alpha-chymotrypsin   245 aa 239 aa 36.8 %
Drosophila melanogaster Jonah 66Ci Alpha-chymotrypsin   245 aa 231 aa 31.6 %
Drosophila melanogaster CG31220 gene product from transcript CG31220-RB Alpha-chymotrypsin   245 aa 268 aa 23.9 %
Drosophila melanogaster CG3916 gene product from transcript CG3916-RA Alpha-chymotrypsin   245 aa 235 aa 35.3 %
Echinococcus multilocularis enteropeptidase Alpha-chymotrypsin   245 aa 279 aa 27.2 %
Drosophila melanogaster CG4914 gene product from transcript CG4914-RA Alpha-chymotrypsin   245 aa 238 aa 34.9 %
Drosophila melanogaster CG10405 gene product from transcript CG10405-RB Alpha-chymotrypsin   245 aa 237 aa 31.6 %
Onchocerca volvulus Alpha-chymotrypsin   245 aa 237 aa 23.6 %
Brugia malayi Trypsin family protein chymase 1, mast cell 247 aa 295 aa 24.1 %
Schistosoma japonicum ko:K09639 transmembrane protease, serine 8, putative Alpha-chymotrypsin   245 aa 239 aa 33.5 %
Onchocerca volvulus Alpha-chymotrypsin   245 aa 250 aa 25.2 %
Drosophila melanogaster Trypsin 29F Alpha-chymotrypsin   245 aa 238 aa 38.2 %
Schistosoma mansoni cercarial elastase (S01 family) Alpha-chymotrypsin   245 aa 218 aa 22.9 %
Echinococcus granulosus glycoprotein Antigen 5 Alpha-chymotrypsin   245 aa 297 aa 22.2 %
Drosophila melanogaster CG4815 gene product from transcript CG4815-RA Alpha-chymotrypsin   245 aa 216 aa 24.1 %
Drosophila melanogaster Spatzle-Processing Enzyme Alpha-chymotrypsin   245 aa 275 aa 29.1 %
Onchocerca volvulus Alpha-chymotrypsin   245 aa 240 aa 27.5 %
Schistosoma japonicum Enteropeptidase, putative Alpha-chymotrypsin   245 aa 268 aa 23.9 %
Echinococcus granulosus Mastin Alpha-chymotrypsin   245 aa 302 aa 26.2 %
Echinococcus multilocularis transmembrane protease serine 3 Alpha-chymotrypsin   245 aa 266 aa 32.7 %
Echinococcus granulosus subfamily S1A unassigned peptidase S01 family Alpha-chymotrypsin   245 aa 300 aa 27.3 %
Echinococcus multilocularis Mastin Alpha-chymotrypsin   245 aa 302 aa 26.2 %
Schistosoma japonicum ko:K09637 transmembrane protease, serine 6, putative Alpha-chymotrypsin   245 aa 240 aa 30.4 %
Schistosoma japonicum ko:K09639 transmembrane protease, serine 8, putative Alpha-chymotrypsin   245 aa 225 aa 32.4 %
Brugia malayi Trypsin family protein Alpha-chymotrypsin   245 aa 249 aa 25.7 %
Drosophila melanogaster CG30287 gene product from transcript CG30287-RA Alpha-chymotrypsin   245 aa 247 aa 32.0 %
Drosophila melanogaster CG18420 gene product from transcript CG18420-RA Alpha-chymotrypsin   245 aa 233 aa 26.2 %
Brugia malayi Trypsin family protein Alpha-chymotrypsin   245 aa 256 aa 21.5 %
Drosophila melanogaster CG34436 gene product from transcript CG34436-RA Alpha-chymotrypsin   245 aa 244 aa 24.6 %
Drosophila melanogaster CG31326 gene product from transcript CG31326-RA Alpha-chymotrypsin   245 aa 270 aa 25.9 %
Drosophila melanogaster CG9673 gene product from transcript CG9673-RB Alpha-chymotrypsin   245 aa 243 aa 25.9 %
Drosophila melanogaster CG30083 gene product from transcript CG30083-RB Alpha-chymotrypsin   245 aa 246 aa 29.7 %
Schistosoma mansoni subfamily S1A unassigned peptidase (S01 family) Alpha-chymotrypsin   245 aa 300 aa 25.7 %
Drosophila melanogaster CG9733 gene product from transcript CG9733-RB Alpha-chymotrypsin   245 aa 261 aa 29.1 %
Schistosoma mansoni cercarial elastase (S01 family) Alpha-chymotrypsin   245 aa 237 aa 24.5 %
Drosophila melanogaster Jonah 65Aii Alpha-chymotrypsin   245 aa 234 aa 31.2 %
Brugia malayi Trypsin family protein chymotrypsin C (caldecrin) 268 aa 236 aa 21.6 %
Drosophila melanogaster CG13744 gene product from transcript CG13744-RA Alpha-chymotrypsin   245 aa 265 aa 34.0 %
Echinococcus multilocularis glycoprotein Antigen 5 Alpha-chymotrypsin   245 aa 296 aa 23.0 %
Drosophila melanogaster CG30323 gene product from transcript CG30323-RB Alpha-chymotrypsin   245 aa 218 aa 21.6 %
Drosophila melanogaster CG14990 gene product from transcript CG14990-RA Alpha-chymotrypsin   245 aa 245 aa 29.0 %
Drosophila melanogaster CG5909 gene product from transcript CG5909-RA Alpha-chymotrypsin   245 aa 259 aa 29.3 %
Drosophila melanogaster CG32277 gene product from transcript CG32277-RA Alpha-chymotrypsin   245 aa 237 aa 27.0 %
Loa Loa (eye worm) hypothetical protein Alpha-chymotrypsin   245 aa 252 aa 21.8 %
Drosophila melanogaster CG33465 gene product from transcript CG33465-RC Alpha-chymotrypsin   245 aa 221 aa 19.0 %
Loa Loa (eye worm) hypothetical protein Alpha-chymotrypsin   245 aa 287 aa 21.6 %
Drosophila melanogaster CG30288 gene product from transcript CG30288-RC Alpha-chymotrypsin   245 aa 236 aa 30.1 %
Schistosoma japonicum Transmembrane protease, serine 9, putative Alpha-chymotrypsin   245 aa 231 aa 22.5 %
Onchocerca volvulus Alpha-chymotrypsin   245 aa 251 aa 22.3 %
Schistosoma mansoni subfamily S1A unassigned peptidase (S01 family) Alpha-chymotrypsin   245 aa 247 aa 31.6 %
Echinococcus granulosus transmembrane protease serine 3 Alpha-chymotrypsin   245 aa 270 aa 31.9 %
Schistosoma mansoni cercarial elastase (S01 family) Alpha-chymotrypsin   245 aa 213 aa 26.8 %
Drosophila melanogaster CG3505 gene product from transcript CG3505-RA Alpha-chymotrypsin   245 aa 252 aa 28.2 %
Drosophila melanogaster Jonah 65Aiii Alpha-chymotrypsin   245 aa 232 aa 32.8 %
Schistosoma japonicum ko:K01346 pancreatic elastase II [EC3.4.21.71], putative Alpha-chymotrypsin   245 aa 314 aa 24.5 %
Drosophila melanogaster CG17239 gene product from transcript CG17239-RB Alpha-chymotrypsin   245 aa 225 aa 32.9 %
Drosophila melanogaster CG11313 gene product from transcript CG11313-RC Alpha-chymotrypsin   245 aa 255 aa 29.0 %
Brugia malayi Trypsin family protein Alpha-chymotrypsin   245 aa 245 aa 24.5 %
Drosophila melanogaster CG33458 gene product from transcript CG33458-RA Alpha-chymotrypsin   245 aa 255 aa 27.1 %
Echinococcus granulosus enteropeptidase Alpha-chymotrypsin   245 aa 279 aa 26.5 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Onchocerca volvulus Putative GMP reductase 0.0518 0.2322 0.5
Toxoplasma gondii IMP dehydrogenas 0.1245 1 0.5
Mycobacterium leprae Probable inosine-5'-monophosphate dehydrogenase GuaB2 (IMP dehydrogenase) (IMPDH) (IMPD) 0.1245 1 1
Schistosoma mansoni nuclear hormone receptor superfamily protein-related 0.0395 0.1032 0.1032
Brugia malayi Integrin alpha pat-2 precursor 0.0664 0.3862 0.2174
Plasmodium falciparum inosine-5'-monophosphate dehydrogenase 0.1171 0.922 0.5
Loa Loa (eye worm) integrin alpha pat-2 0.1023 0.7653 0.747
Brugia malayi inosine-5'-monophosphate dehydrogenase 0.0518 0.2322 0.021
Mycobacterium ulcerans inosine 5'-monophosphate dehydrogenase 0.1245 1 1
Mycobacterium tuberculosis Probable inosine-5'-monophosphate dehydrogenase GuaB2 (imp dehydrogenase) (inosinic acid dehydrogenase) (inosinate dehydrogenase 0.1245 1 1
Schistosoma mansoni integrin alpha 0.0664 0.3862 0.3862
Mycobacterium ulcerans inosine 5-monophosphate dehydrogenase 0.1171 0.922 0.8869
Trypanosoma brucei GMP reductase 0.1245 1 0.5
Trypanosoma cruzi GMP reductase 0.1245 1 0.5
Leishmania major inosine-5-monophosphate dehydrogenase 0.1245 1 0.5
Leishmania major guanosine monophosphate reductase 0.1245 1 0.5
Loa Loa (eye worm) GMP reductase 0.0518 0.2322 0.1723
Trypanosoma cruzi inosine-5'-monophosphate dehydrogenase, putative 0.1245 1 0.5
Echinococcus granulosus inosine 5' monophosphate dehydrogenase 2 0.1245 1 1
Loa Loa (eye worm) IMP dehydrogenase 1 0.1245 1 1
Echinococcus multilocularis inosine 5' monophosphate dehydrogenase 2 0.1245 1 1
Echinococcus multilocularis integrin alpha 3 0.0509 0.2228 0.2228
Trypanosoma brucei inosine-5'-monophosphate dehydrogenase 0.1245 1 0.5
Loa Loa (eye worm) hypothetical protein 0.0502 0.2157 0.1545
Echinococcus granulosus integrin alpha 3 0.0509 0.2228 0.2228
Trypanosoma cruzi inosine-5'-monophosphate dehydrogenase, putative 0.1245 1 0.5
Mycobacterium leprae Probable inosine-5'-monophosphate dehydrogenase GuaB3 (IMP dehydrogenase 2) (inosinic acid dehydrogenase) (inosinate dehydrogena 0.0654 0.376 0.0954
Wolbachia endosymbiont of Brugia malayi IMP dehydrogenase 0.1245 1 0.5
Schistosoma mansoni inosine-5-monophosphate dehydrogenase 0.1245 1 1
Loa Loa (eye worm) hypothetical protein 0.0521 0.2358 0.1761
Brugia malayi GMP reductase 0.0518 0.2322 0.021
Trypanosoma cruzi GMP reductase 0.1245 1 0.5
Trypanosoma cruzi inosine-5'-monophosphate dehydrogenase, putative 0.1245 1 0.5
Plasmodium vivax inosine-5'-monophosphate dehydrogenase, putative 0.1171 0.922 0.5
Brugia malayi inosine-5'-monophosphate dehydrogenase 0.0518 0.2322 0.021

Activities

Activity type Activity value Assay description Source Reference
Ki (binding) = 5.6 nM In vitro inhibitory activity was determined against human heart chymase ChEMBL. 11312928
Ki (binding) = 5.6 nM Compound was evaluated for inhibitory activity against human heart chymase (HHC) ChEMBL. 9871511
Ki (binding) = 5.6 nM In vitro inhibitory activity was determined against human heart chymase ChEMBL. 11312928
Ki (binding) = 5.6 nM Compound was evaluated for inhibitory activity against human heart chymase (HHC) ChEMBL. 9871511
Ki (binding) = 364 nM In vitro inhibitory activity was determined against bovine pancreas chymotrypsin ChEMBL. 11312928
Ki (binding) = 364 nM Compound was evaluated for inhibitory activity against Chymotrypsinogen ChEMBL. 9871511
Ki (binding) = 364 nM In vitro inhibitory activity was determined against bovine pancreas chymotrypsin ChEMBL. 11312928
Ki (binding) = 364 nM Compound was evaluated for inhibitory activity against Chymotrypsinogen ChEMBL. 9871511
Ratio (binding) = 65 Selectivity ratio of Bovine chymotrypsin (BCT - Ki) to human heart chymase (HHC - Ki) ChEMBL. 9871511
Selectivity (binding) = 65 The selectivity was determined for chymotrypsin to that of chymase ChEMBL. 11312928

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

2 literature references were collected for this gene.

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