Detailed information for compound 1773953

Basic information

Technical information
  • TDR Targets ID: 1773953
  • Name: (2S)-2-[[2-diethylamino-5-(methylsulfonyl-pro pan-2-ylamino)pyrimidin-4-yl]amino]-3-[4-(pyr rolidine-1-carbonyloxy)phenyl]propanoic acid
  • MW: 562.682 | Formula: C26H38N6O6S
  • H donors: 2 H acceptors: 7 LogP: 3.49 Rotable bonds: 14
    Rule of 5 violations (Lipinski): 2
  • SMILES: CCN(c1ncc(c(n1)N[C@H](C(=O)O)Cc1ccc(cc1)OC(=O)N1CCCC1)N(S(=O)(=O)C)C(C)C)CC
  • InChi: 1S/C26H38N6O6S/c1-6-30(7-2)25-27-17-22(32(18(3)4)39(5,36)37)23(29-25)28-21(24(33)34)16-19-10-12-20(13-11-19)38-26(35)31-14-8-9-15-31/h10-13,17-18,21H,6-9,14-16H2,1-5H3,(H,33,34)(H,27,28,29)/t21-/m0/s1
  • InChiKey: SDRNIMLNYYTUKR-NRFANRHFSA-N  

Network

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Synonyms

  • (2S)-2-[[2-diethylamino-5-(isopropyl-methylsulfonyl-amino)pyrimidin-4-yl]amino]-3-[4-(pyrrolidine-1-carbonyloxy)phenyl]propanoic acid
  • (2S)-2-[[2-diethylamino-5-(isopropyl-methylsulfonylamino)-4-pyrimidinyl]amino]-3-[4-(oxo-1-pyrrolidinylmethoxy)phenyl]propanoic acid
  • (2S)-2-[[2-diethylamino-5-(isopropyl-mesyl-amino)pyrimidin-4-yl]amino]-3-[4-(pyrrolidine-1-carbonyloxy)phenyl]propionic acid
  • (2S)-2-[[2-diethylamino-5-(methylsulfonyl-propan-2-yl-amino)pyrimidin-4-yl]amino]-3-(4-pyrrolidin-1-ylcarbonyloxyphenyl)propanoic acid

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) References
Homo sapiens integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) Starlite/ChEMBL References
Homo sapiens integrin, beta 7 Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Schistosoma japonicum ko:K06464 integrin beta 2, putative Get druggable targets OG5_127959 All targets in OG5_127959
Echinococcus granulosus integrin beta 2 Get druggable targets OG5_127959 All targets in OG5_127959
Brugia malayi Integrin beta pat-3 precursor Get druggable targets OG5_127959 All targets in OG5_127959
Schistosoma mansoni integrin beta subunit Get druggable targets OG5_127959 All targets in OG5_127959
Schistosoma japonicum Integrin beta-PS precursor, putative Get druggable targets OG5_127959 All targets in OG5_127959
Schistosoma mansoni integrin alpha-4 Get druggable targets OG5_133980 All targets in OG5_133980
Schistosoma japonicum Integrin beta-3 precursor, putative Get druggable targets OG5_127959 All targets in OG5_127959
Loa Loa (eye worm) integrin beta-2 Get druggable targets OG5_127959 All targets in OG5_127959
Echinococcus multilocularis integrin beta 2 Get druggable targets OG5_127959 All targets in OG5_127959

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Echinococcus multilocularis integrin alpha 3 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 1032 aa 873 aa 22.0 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Echinococcus granulosus tyrosine protein kinase ABL1 0.1126 0.0746 0.1089
Mycobacterium tuberculosis Conserved hypothetical protein 0.0153 0.0024 0.5
Brugia malayi Integrin beta pat-3 precursor 0.0714 0.0441 1
Onchocerca volvulus 0.0545 0.0315 0.0439
Plasmodium falciparum plasmepsin X 0.0545 0.0315 1
Plasmodium falciparum plasmepsin IV 0.0545 0.0315 1
Onchocerca volvulus 0.9087 0.666 1
Toxoplasma gondii eukaryotic aspartyl protease superfamily protein 0.0545 0.0315 1
Mycobacterium leprae Possible phosphoglycerate mutase 0.0153 0.0024 0.5
Mycobacterium tuberculosis Probable conserved lipoprotein LpqD 0.0153 0.0024 0.5
Entamoeba histolytica phosphatidylinositol 3-kinase, putative 0.043 0.0229 0.056
Brugia malayi hypothetical protein 0.0545 0.0315 0.7126
Toxoplasma gondii aspartyl proteinase (eimepsin), putative 0.0545 0.0315 1
Entamoeba histolytica phosphoglycerate mutase family protein. putative 0.0153 0.0024 0.0031
Schistosoma mansoni cathepsin D (A01 family) 0.0545 0.0315 0.0303
Brugia malayi Eukaryotic aspartyl protease family protein 0.0545 0.0315 0.7126
Trypanosoma brucei 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative 0.9087 0.666 1
Echinococcus multilocularis phosphatidylinositol 4,5 bisphosphate 3 kinase 0.0612 0.0364 0.0513
Mycobacterium leprae conserved hypothetical protein 0.0153 0.0024 0.5
Plasmodium vivax aspartyl proteinase, putative 0.0545 0.0315 1
Schistosoma mansoni cathepsin D (A01 family) 0.0545 0.0315 0.0303
Brugia malayi Phosphatidylinositol 3- and 4-kinase family protein 0.0137 0.0012 0.0187
Loa Loa (eye worm) hypothetical protein 0.5209 0.378 0.5675
Trichomonas vaginalis phosphatidylinositol 3-kinase catalytic subunit alpha, beta, delta, putative 0.0327 0.0152 0.4636
Trichomonas vaginalis conserved hypothetical protein 0.0153 0.0024 0.0391
Trypanosoma cruzi phosphoglycerate mutase protein, putative 0.0153 0.0024 0.0036
Schistosoma mansoni 6-phosphofructokinase 0.9087 0.666 0.6656
Schistosoma mansoni tyrosine kinase 0.111 0.0734 0.0723
Mycobacterium leprae conserved hypothetical protein 0.0153 0.0024 0.5
Trypanosoma brucei Histidine phosphatase superfamily (branch 1), putative 0.0153 0.0024 0.0018
Trypanosoma cruzi phosphatidylinositol 3-kinase vps34-like 0.0137 0.0012 0.0018
Brugia malayi phosphoglycerate mutase family protein 0.0153 0.0024 0.0458
Brugia malayi hypothetical protein 0.0545 0.0315 0.7126
Echinococcus multilocularis tyrosine protein kinase ABL1 0.1126 0.0746 0.1089
Trypanosoma cruzi phosphatidylinositol 3-kinase 2, putative 0.043 0.0229 0.0344
Schistosoma mansoni hypothetical protein 0.0153 0.0024 0.0012
Mycobacterium leprae PROBABLE PHOSPHOGLYCERATE MUTASE 1 GPM1 (PHOSPHOGLYCEROMUTASE) (PGAM) (BPG-DEPENDENT PGAM) 0.0153 0.0024 0.5
Mycobacterium tuberculosis PE-PGRS family protein PE_PGRS11 0.0153 0.0024 0.5
Loa Loa (eye worm) aspartyl protease 6 0.0545 0.0315 0.0473
Plasmodium vivax plasmepsin IV, putative 0.0545 0.0315 1
Trypanosoma cruzi 6-phosphofructo-2-kinase 1 0.8933 0.6546 0.9829
Trichomonas vaginalis phosphoglycerate mutase, putative 0.0153 0.0024 0.0391
Trypanosoma cruzi Histidine phosphatase superfamily (branch 1), putative 0.0153 0.0024 0.0036
Plasmodium falciparum plasmepsin III 0.0545 0.0315 1
Trypanosoma cruzi Histidine phosphatase superfamily (branch 1), putative 0.0153 0.0024 0.0036
Trypanosoma brucei 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative 0.3877 0.279 0.4179
Loa Loa (eye worm) hypothetical protein 0.8933 0.6546 0.9829
Brugia malayi Tyrosine-protein kinase abl-1 0.0678 0.0413 0.938
Loa Loa (eye worm) hypothetical protein 0.0545 0.0315 0.0473
Plasmodium falciparum plasmepsin VI 0.0545 0.0315 1
Trypanosoma brucei Histidine phosphatase superfamily (branch 1), putative 0.0153 0.0024 0.0018
Echinococcus multilocularis 6 phosphofructo 2 kinase:fructose 2 0.9087 0.666 1
Trypanosoma cruzi phosphoglycerate mutase family member 5, putative 0.0153 0.0024 0.0036
Trypanosoma cruzi phosphoglycerate mutase, putative 0.0153 0.0024 0.0036
Echinococcus granulosus integrin beta 2 0.0616 0.0368 0.0518
Plasmodium vivax plasmepsin V, putative 0.0545 0.0315 1
Entamoeba histolytica hypothetical protein 0.0363 0.0179 0.0431
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Schistosoma mansoni phosphatidylinositol-45-bisphosphate 3-kinase catalytic subunit alpha PI3K 0.0612 0.0364 0.0353
Entamoeba histolytica phosphoglycerate mutase family protein, putative 0.0153 0.0024 0.0031
Leishmania major 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative 0.9087 0.666 1
Echinococcus granulosus 6 phosphofructo 2 kinase:fructose 2 0.9087 0.666 1
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Trypanosoma cruzi 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatas, putative 0.0153 0.0024 0.0036
Trypanosoma cruzi 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative 0.9087 0.666 1
Echinococcus multilocularis phosphatidylinositol 4 phosphate 3 kinase C2 0.0241 0.0089 0.0098
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Trypanosoma cruzi Histidine phosphatase superfamily (branch 1), putative 0.0153 0.0024 0.0036
Schistosoma mansoni integrin alpha-4 0.0472 0.026 0.0249
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Schistosoma mansoni hypothetical protein 0.0153 0.0024 0.0012
Loa Loa (eye worm) hypothetical protein 0.0153 0.0024 0.0036
Leishmania major 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative 0.8933 0.6546 0.9828
Mycobacterium tuberculosis Possible phosphoglycerate mutase Gpm2 (phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) 0.0153 0.0024 0.5
Treponema pallidum phosphoglyceromutase 0.0153 0.0024 0.5
Brugia malayi Phosphatidylinositol 3- and 4-kinase family protein 0.0241 0.0089 0.1947
Brugia malayi phosphoglycerate mutase family protein 0.0153 0.0024 0.0458
Schistosoma mansoni hypothetical protein 0.0153 0.0024 0.0012
Loa Loa (eye worm) hypothetical protein 0.0189 0.005 0.0075
Trypanosoma cruzi glycerolphosphate mutase, putative 0.0153 0.0024 0.0036
Entamoeba histolytica phosphatidylinositol 3-kinase, putative 0.0363 0.0179 0.0431
Schistosoma mansoni hypothetical protein 0.0153 0.0024 0.0012
Trypanosoma brucei phosphoglycerate mutase, putative 0.0153 0.0024 0.0018
Loa Loa (eye worm) hypothetical protein 0.0545 0.0315 0.0473
Loa Loa (eye worm) hypothetical protein 0.9087 0.666 1
Brugia malayi Tyrosine-protein kinase abl-1 0.0464 0.0254 0.5733
Plasmodium falciparum plasmepsin I 0.0545 0.0315 1
Brugia malayi aspartic protease BmAsp-1, identical 0.0545 0.0315 0.7126
Plasmodium vivax aspartyl protease, putative 0.0545 0.0315 1
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Schistosoma mansoni phosphoglycerate mutase 0.0153 0.0024 0.0012
Brugia malayi aspartic protease BmAsp-2, identical 0.0545 0.0315 0.7126
Trypanosoma brucei glycerolphosphate mutase, putative 0.0153 0.0024 0.0018
Loa Loa (eye worm) integrin beta-2 0.0714 0.0441 0.0661
Trichomonas vaginalis phopsphatidylinositol 3-kinase, drosophila, putative 0.043 0.0229 0.7173
Schistosoma mansoni hypothetical protein 0.0153 0.0024 0.0012
Loa Loa (eye worm) hypothetical protein 0.0153 0.0024 0.0036
Echinococcus multilocularis tyrosine protein kinase Abl 0.0464 0.0254 0.0347
Trypanosoma cruzi 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative 0.3877 0.279 0.4189
Toxoplasma gondii aspartyl protease 0.0545 0.0315 1
Trypanosoma cruzi phosphatidylinositol 3-kinase 2, putative 0.043 0.0229 0.0344
Loa Loa (eye worm) hypothetical protein 0.0432 0.0231 0.0346
Echinococcus granulosus phosphatidylinositol 4 phosphate 3 kinase C2 0.0241 0.0089 0.0098
Plasmodium falciparum plasmepsin VII 0.0545 0.0315 1
Trichomonas vaginalis phosphoglycerate mutase, putative 0.0153 0.0024 0.0391
Mycobacterium ulcerans fructose-2,6-bisphosphatase GpmB 0.5363 0.3894 1
Plasmodium falciparum plasmepsin VIII, putative 0.0545 0.0315 1
Plasmodium vivax aspartyl protease, putative 0.0545 0.0315 1
Echinococcus granulosus phosphatidylinositol 45 bisphosphate 3 kinase 0.0612 0.0364 0.0513
Mycobacterium ulcerans hypothetical protein 0.5363 0.3894 1
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Trypanosoma cruzi Histidine phosphatase superfamily (branch 1), putative 0.0153 0.0024 0.0036
Mycobacterium tuberculosis Glucosyl-3-phosphoglycerate phosphatase GpgP 0.0153 0.0024 0.5
Giardia lamblia Hypothetical protein 0.5363 0.3894 1
Plasmodium vivax aspartyl proteinase, putative 0.0545 0.0315 1
Trypanosoma brucei phosphoglycerate mutase protein, putative 0.0153 0.0024 0.0018
Trichomonas vaginalis Clan AA, family A1, cathepsin D-like aspartic peptidase 0.0545 0.0315 1
Echinococcus multilocularis integrin beta 2 0.0616 0.0368 0.0518
Mycobacterium leprae Probable phosphoglycerate mutase (phosphoglyceromutase) (phosphoglycerate phosphomutase) 0.0153 0.0024 0.5
Plasmodium falciparum plasmepsin V 0.0545 0.0315 1
Loa Loa (eye worm) aspartic protease BmAsp-1 0.0545 0.0315 0.0473
Loa Loa (eye worm) kelch domain-containing protein family protein 0.0126 0.0004 0.0005
Trichomonas vaginalis phosphatidylinositol kinase, putative 0.043 0.0229 0.7173
Mycobacterium leprae conserved hypothetical protein 0.0153 0.0024 0.5
Entamoeba histolytica phosphatidylinositol 3-kinase 1, putative 0.0414 0.0217 0.053
Toxoplasma gondii aspartyl protease ASP1 0.0545 0.0315 1
Trichomonas vaginalis phosphoglycerate mutase, putative 0.0153 0.0024 0.0391
Entamoeba histolytica phosphatidylinositol 3-kinase, putative 0.0173 0.0039 0.0069
Trypanosoma cruzi phosphoglycerate mutase, putative 0.0153 0.0024 0.0036
Brugia malayi phosphoinositide 3'-hydroxykinase p110-alpha subunit, putative 0.0182 0.0045 0.0943
Loa Loa (eye worm) hypothetical protein 0.0241 0.0089 0.0133
Brugia malayi Phosphatidylinositol 3- and 4-kinase family protein 0.043 0.0229 0.5164
Mycobacterium leprae POSSIBLE HYDROLASE MUTT1 0.0153 0.0024 0.5
Trypanosoma cruzi 6-phosphofructo-2-kinase 1 0.8933 0.6546 0.9829
Trichomonas vaginalis conserved hypothetical protein 0.0153 0.0024 0.0391
Trichomonas vaginalis phosphatidylinositol 3-kinase catalytic subunit gamma, putative 0.043 0.0229 0.7173
Trichomonas vaginalis phosphoglycerate mutase, putative 0.0153 0.0024 0.0391
Trypanosoma brucei Serine/threonine-protein phosphatase PGAM5, mitochondrial, putative 0.0153 0.0024 0.0018
Trypanosoma cruzi Histidine phosphatase superfamily (branch 1), putative 0.0153 0.0024 0.0036
Trypanosoma brucei 6-phosphofructo-2-kinase 2 0.8933 0.6546 0.9829
Schistosoma mansoni integrin beta subunit 0.049 0.0274 0.0262
Loa Loa (eye worm) hypothetical protein 0.0126 0.0004 0.0005
Trypanosoma brucei 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatas, putative 0.0153 0.0024 0.0018
Plasmodium falciparum plasmepsin II 0.0545 0.0315 1
Trichomonas vaginalis phosphatidylinositol 3-kinase class, putative 0.0327 0.0152 0.4636
Trypanosoma cruzi 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative 0.9087 0.666 1
Loa Loa (eye worm) phosphoglycerate mutase 0.0153 0.0024 0.0036
Loa Loa (eye worm) aspartic protease BmAsp-2 0.0545 0.0315 0.0473
Giardia lamblia Hypothetical protein 0.5363 0.3894 1
Trypanosoma brucei Histidine phosphatase superfamily (branch 1), putative 0.0153 0.0024 0.0018
Mycobacterium leprae probable isochorismate synthase EntC 0.0153 0.0024 0.5
Chlamydia trachomatis 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0.0153 0.0024 0.5
Schistosoma mansoni phosphoglycerate mutase 0.0153 0.0024 0.0012
Trichomonas vaginalis phosphoglycerate mutase, putative 0.0153 0.0024 0.0391
Onchocerca volvulus 0.0545 0.0315 0.0439
Trypanosoma cruzi 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatas, putative 0.0153 0.0024 0.0036
Loa Loa (eye worm) hypothetical protein 0.0153 0.0024 0.0036
Leishmania major 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase-1-like protein 0.3877 0.279 0.4169
Echinococcus multilocularis cathepsin d (lysosomal aspartyl protease) 0.0545 0.0315 0.0439
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Plasmodium falciparum plasmepsin IX 0.0545 0.0315 1
Brugia malayi Pepsin A precursor 0.0545 0.0315 0.7126
Trypanosoma cruzi 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative 0.3877 0.279 0.4189
Brugia malayi UBASH3A protein homolog 0.0153 0.0024 0.0458
Plasmodium vivax aspartyl protease, putative 0.0545 0.0315 1
Mycobacterium tuberculosis Conserved protein 0.0153 0.0024 0.5
Trypanosoma cruzi glycerolphosphate mutase, putative 0.0153 0.0024 0.0036
Mycobacterium tuberculosis Probable phosphoglycerate mutase (phosphoglyceromutase) (phosphoglycerate phosphomutase) 0.0153 0.0024 0.5
Loa Loa (eye worm) TK/ABL protein kinase 0.1126 0.0746 0.112
Trypanosoma cruzi phosphoglycerate mutase family member 5, putative 0.0153 0.0024 0.0036
Schistosoma mansoni hypothetical protein 0.0153 0.0024 0.0012
Loa Loa (eye worm) phosphatidylinositol 3 0.0545 0.0314 0.0472
Toxoplasma gondii aspartyl protease ASP3 0.0545 0.0315 1
Mycobacterium tuberculosis Possible hydrolase MutT1 0.0153 0.0024 0.5
Entamoeba histolytica phosphoglycerate mutase family protein, putative 0.5363 0.3894 1
Loa Loa (eye worm) hypothetical protein 0.0153 0.0024 0.0036
Loa Loa (eye worm) hypothetical protein 0.0545 0.0315 0.0473
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Echinococcus granulosus cathepsin d lysosomal aspartyl protease 0.0545 0.0315 0.0439
Trypanosoma cruzi phosphoglycerate mutase protein, putative 0.0153 0.0024 0.0036
Mycobacterium tuberculosis Conserved protein 0.0153 0.0024 0.5
Mycobacterium leprae PROBABLE PHOSPHOGLYCERATE MUTASE (PHOSPHOGLYCEROMUTASE) 0.0153 0.0024 0.5
Schistosoma mansoni subfamily A1A unassigned peptidase (A01 family) 0.0545 0.0315 0.0303
Entamoeba histolytica phosphoglycerate mutase family protein, putative 0.0153 0.0024 0.0031

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) = 0.0227 uM Inhibition of alpha4beta1 integrin-mediated human jurkat cell adhesion to fibronectin in absence of human serum albumin ChEMBL. 23777782
IC50 (binding) = 0.223 uM Inhibition of alpha4beta7 integrin-mediated human 8866 cell adhesion to MadCAM-1 ChEMBL. 23777782
IC50 (binding) = 7.2211 uM Inhibition of alpha4beta1 integrin-mediated human jurkat cell adhesion to fibronectin in presence of human serum albumin ChEMBL. 23777782

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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