Detailed information for compound 345616

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 642.668 | Formula: C28H40BrN3O5S2
  • H donors: 2 H acceptors: 4 LogP: 4.21 Rotable bonds: 17
    Rule of 5 violations (Lipinski): 2
  • SMILES: CC(C[C@@H](C(=O)NC(C(=O)C(=O)N1CCOCC1)Cc1ccc(cc1)Br)NC(=O)CCCCC1SSCC1)C
  • InChi: 1S/C28H40BrN3O5S2/c1-19(2)17-24(30-25(33)6-4-3-5-22-11-16-38-39-22)27(35)31-23(18-20-7-9-21(29)10-8-20)26(34)28(36)32-12-14-37-15-13-32/h7-10,19,22-24H,3-6,11-18H2,1-2H3,(H,30,33)(H,31,35)/t22?,23?,24-/m0/s1
  • InChiKey: VCKGCCQMUHSLGO-VHYCJAOWSA-N  

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Sus scrofa Calpain 1 References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Schistosoma japonicum Calpain-1 catalytic subunit, putative Get druggable targets OG5_127139 All targets in OG5_127139
Schistosoma mansoni family C2 unassigned peptidase (C02 family) Get druggable targets OG5_127139 All targets in OG5_127139
Schistosoma japonicum ko:K08585 calpain, invertebrate, putative Get druggable targets OG5_127139 All targets in OG5_127139
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_127139 All targets in OG5_127139
Loa Loa (eye worm) calpain family protein 1 Get druggable targets OG5_127139 All targets in OG5_127139
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_127139 All targets in OG5_127139
Echinococcus multilocularis calpain family protein 1, d Get druggable targets OG5_127139 All targets in OG5_127139
Echinococcus granulosus calpain A Get druggable targets OG5_127139 All targets in OG5_127139
Schistosoma mansoni family C2 unassigned peptidase (C02 family) Get druggable targets OG5_127139 All targets in OG5_127139
Brugia malayi calpain family protein 1 Get druggable targets OG5_127139 All targets in OG5_127139
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_127139 All targets in OG5_127139
Echinococcus granulosus family C2 unassigned peptidase C02 family Get druggable targets OG5_127139 All targets in OG5_127139
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_127139 All targets in OG5_127139
Brugia malayi calpain family protein 1 Get druggable targets OG5_127139 All targets in OG5_127139
Schistosoma mansoni family C2 unassigned peptidase (C02 family) Get druggable targets OG5_127139 All targets in OG5_127139
Loa Loa (eye worm) calpain family protein 1 Get druggable targets OG5_127139 All targets in OG5_127139
Onchocerca volvulus Get druggable targets OG5_127139 All targets in OG5_127139
Echinococcus multilocularis calpain A Get druggable targets OG5_127139 All targets in OG5_127139
Echinococcus multilocularis family C2 unassigned peptidase (C02 family) Get druggable targets OG5_127139 All targets in OG5_127139
Schistosoma japonicum Calpain-A, putative Get druggable targets OG5_127139 All targets in OG5_127139

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Echinococcus multilocularis hypothetical protein Calpain 1   714 aa 716 aa 33.1 %
Schistosoma mansoni calpain (C02 family) Calpain 1   714 aa 684 aa 31.0 %
Echinococcus multilocularis calpain Calpain 1   714 aa 695 aa 38.6 %
Schistosoma japonicum Calpain-9, putative Calpain 1   714 aa 671 aa 33.8 %
Echinococcus granulosus calpain A Calpain 1   714 aa 753 aa 31.5 %
Echinococcus granulosus calpain Calpain 1   714 aa 695 aa 38.6 %
Schistosoma mansoni calpain C (C02 family) Calpain 1   714 aa 715 aa 33.4 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Plasmodium falciparum peptidase, putative 0.0014 0.0229 0.5311
Trypanosoma cruzi hypothetical protein, conserved 0.0014 0.0229 0.0564
Trypanosoma cruzi hypothetical protein, conserved 0.0014 0.0229 0.0564
Trypanosoma cruzi oligopeptidase b 0.0052 0.1481 0.3651
Giardia lamblia Sgs1 DNA helicase, putative 0.0009 0.0061 0.0234
Mycobacterium leprae PROBABLE PROTEASE II PTRBB (OLIGOPEPTIDASE B) 0.0052 0.1481 0.5
Brugia malayi calpain 7 0.002 0.0429 0.0931
Trypanosoma brucei ATP-dependent DEAD/H DNA helicase recQ, putative 0.0011 0.0143 0.0353
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trypanosoma brucei calpain-like protein, putative 0.002 0.0429 0.1058
Schistosoma mansoni calpain-7 (C02 family) 0.002 0.0429 0.0922
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Echinococcus granulosus acylamino acid releasing enzyme 0.0014 0.0229 0.0564
Brugia malayi ATP-dependent DNA helicase, RecQ family protein 0.0009 0.0061 0.001
Schistosoma mansoni prolyl oligopeptidase (S09 family) 0.0014 0.0229 0.0421
Onchocerca volvulus Prolyl endopeptidase homolog 0.0131 0.4058 1
Echinococcus granulosus Dipeptidyl peptidase 9 0.0014 0.0229 0.0564
Leishmania major dipeptidyl-peptidase 8-like serine peptidase, putative,serine peptidase, Clan SC, Family S9B 0.0014 0.0229 0.0219
Plasmodium vivax ADP-dependent DNA helicase RecQ, putative 0.0014 0.024 0.0543
Schistosoma mansoni prolyl oligopeptidase (S09 family) 0.0131 0.4058 1
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Loa Loa (eye worm) hypothetical protein 0.0014 0.0229 0.0173
Loa Loa (eye worm) hypothetical protein 0.0047 0.1306 0.1256
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trypanosoma cruzi calpain-like cysteine peptidase, putative 0.002 0.0429 0.1058
Trichomonas vaginalis Clan SC, family S9, acylaminoacyl-peptidase-like serine peptidase 0.0014 0.0229 0.4977
Plasmodium vivax calpain, putative 0.002 0.0429 1
Toxoplasma gondii prolyl endopeptidase 0.0131 0.4058 1
Loa Loa (eye worm) prolyl oligopeptidase 0.0014 0.0229 0.0173
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trypanosoma cruzi calpain-like cysteine peptidase, putative 0.002 0.0429 0.1058
Trypanosoma brucei antigen, putative 0.002 0.0429 0.1058
Leishmania major kinesin, putative 0.0014 0.0234 0.0232
Mycobacterium tuberculosis Probable protease II PtrBb [second part] (oligopeptidase B) 0.0052 0.1481 0.2839
Toxoplasma gondii dipeptidyl peptidase iv (dpp iv) n-terminal region domain-containing protein 0.0014 0.0229 0.0421
Echinococcus multilocularis Dipeptidyl peptidase 9 0.0014 0.0229 0.0564
Brugia malayi hypothetical protein 0.012 0.3702 0.911
Loa Loa (eye worm) calpain 5 0.0014 0.0234 0.0179
Schistosoma mansoni family C2 unassigned peptidase (C02 family) 0.0053 0.1501 0.3604
Trypanosoma cruzi cysteine peptidase, Clan CA, family C2, putative 0.002 0.0429 0.1058
Schistosoma mansoni calpain (C02 family) 0.002 0.0429 0.0922
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trichomonas vaginalis Phosphoglycerol transferase I, putative 0.0008 0.0057 0.1233
Echinococcus multilocularis ATP dependent DNA helicase Q5 0.0009 0.0061 0.015
Trypanosoma cruzi dipeptidyl-peptidase 8-like serine peptidase 0.0014 0.0229 0.0564
Trichomonas vaginalis DNA helicase recq, putative 0.0011 0.0143 0.3116
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Entamoeba histolytica dipeptidyl-peptidase, putative 0.0014 0.0229 0.9771
Brugia malayi calpain 5 0.0014 0.0234 0.0444
Schistosoma mansoni calpain C (C02 family) 0.002 0.0429 0.0922
Trypanosoma brucei calpain-like cysteine peptidase, putative 0.002 0.0429 0.1058
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Onchocerca volvulus Dipeptidyl peptidase family member 1 homolog 0.0014 0.0229 0.043
Entamoeba histolytica calpain large subunit domain III containing protein 0.0014 0.0234 1
Loa Loa (eye worm) hypothetical protein 0.0017 0.0322 0.0267
Trypanosoma brucei serine peptidase, clan SC, family S9A-like protein 0.0052 0.1481 0.3651
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Giardia lamblia Alanyl dipeptidyl peptidase 0.0014 0.0229 1
Echinococcus multilocularis bloom syndrome protein 0.0021 0.046 0.1133
Mycobacterium tuberculosis Probable protease II PtrBa [first part] (oligopeptidase B) 0.0117 0.3609 0.708
Entamoeba histolytica prolyl oligopeptidase family protein 0.0014 0.0229 0.9771
Trypanosoma cruzi oligopeptidase B-like protein, putative 0.0052 0.1481 0.3651
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trypanosoma cruzi kinesin, putative 0.0014 0.0234 0.0577
Entamoeba histolytica recQ family helicase, putative 0.0011 0.0143 0.6117
Trypanosoma brucei calpain-like protein, putative 0.002 0.0429 0.1058
Trypanosoma cruzi cysteine peptidase, Clan CA, family C2, putative 0.002 0.0429 0.1058
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Entamoeba histolytica prolyl oligopeptidase family protein 0.0014 0.0229 0.9771
Echinococcus multilocularis dipeptidyl aminopeptidaseprotein 0.0014 0.0229 0.0564
Leishmania major oligopeptidase b 0.0052 0.1481 0.3418
Echinococcus multilocularis ATP dependent DNA helicase Q1 0.0009 0.0061 0.015
Trypanosoma cruzi cysteine peptidase, Clan CA, family C2, putative 0.002 0.0429 0.1058
Schistosoma mansoni Mername-AA248 (C02 family) 0.002 0.0429 0.0922
Trypanosoma cruzi calpain-like cysteine peptidase, putative 0.002 0.0429 0.1058
Brugia malayi Bloom's syndrome protein homolog 0.0021 0.046 0.1007
Trichomonas vaginalis conserved hypothetical protein 0.0014 0.0229 0.4977
Trypanosoma brucei prolyl endopeptidase 0.0131 0.4058 1
Echinococcus granulosus calpain A 0.0055 0.1579 0.3891
Trypanosoma cruzi serine peptidase, Clan SC, Family S9B 0.0014 0.0229 0.0564
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trichomonas vaginalis DNA helicase recq, putative 0.0021 0.046 1
Trypanosoma cruzi ATP-dependent DEAD/H DNA helicase recQ, putative 0.0011 0.0143 0.0353
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Schistosoma mansoni blooms syndrome DNA helicase 0.0016 0.0317 0.0641
Loa Loa (eye worm) ATP-dependent DNA helicase 0.0009 0.0061 0.0004
Leishmania major calpain-like cysteine peptidase, putative,cysteine peptidase, Clan CA, family C2, putative 0.002 0.0429 0.0731
Schistosoma mansoni subfamily S9B unassigned peptidase (S09 family) 0.0014 0.0229 0.0421
Schistosoma mansoni hypothetical protein 0.005 0.1427 0.3419
Trypanosoma brucei calpain-like protein, putative 0.002 0.0429 0.1058
Entamoeba histolytica hypothetical protein, conserved 0.0014 0.0229 0.9771
Echinococcus granulosus ATP dependent DNA helicase Q5 0.0009 0.0061 0.015
Mycobacterium tuberculosis Probable epoxide hydrolase EphA (epoxide hydratase) (arene-oxide hydratase) 0.0162 0.5074 1
Echinococcus granulosus calpain A 0.002 0.0429 0.1058
Loa Loa (eye worm) hypothetical protein 0.0039 0.1047 0.0996
Entamoeba histolytica protein kinase, putative 0.0014 0.0234 1
Loa Loa (eye worm) calpain family protein 1 0.0053 0.1501 0.1453
Schistosoma mansoni family C2 unassigned peptidase (C02 family) 0.0055 0.1579 0.3799
Trypanosoma brucei oligopeptidase b 0.0052 0.1481 0.3651
Echinococcus multilocularis calpain 0.002 0.0429 0.1058
Echinococcus granulosus calpain 7 C02 family 0.002 0.0429 0.1058
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Onchocerca volvulus 0.0033 0.0852 0.1988
Echinococcus multilocularis family C2 unassigned peptidase (C02 family) 0.0055 0.1579 0.3891
Toxoplasma gondii ATP-dependent DNA helicase, RecQ family protein 0.0009 0.0061 0.00000000031965
Loa Loa (eye worm) RecQ helicase 0.0021 0.046 0.0405
Loa Loa (eye worm) hypothetical protein 0.0053 0.1501 0.1453
Echinococcus multilocularis calpain 7 (C02 family) 0.002 0.0429 0.1058
Echinococcus multilocularis hypothetical protein 0.002 0.0429 0.1058
Toxoplasma gondii ATP-dependent DNA helicase, RecQ family protein 0.0014 0.0234 0.0434
Schistosoma mansoni calpain-7 (C02 family) 0.002 0.0429 0.0922
Trypanosoma cruzi calpain cysteine peptidase, putative 0.002 0.0429 0.1058
Trypanosoma brucei calpain-like protein, putative 0.002 0.0429 0.1058
Schistosoma mansoni prolyl oligopeptidase (S09 family) 0.0131 0.4058 1
Entamoeba histolytica dipeptidyl-peptidase, putative 0.0014 0.0229 0.9771
Schistosoma mansoni acylaminoacyl-peptidase (S09 family) 0.0014 0.0229 0.0421
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Schistosoma mansoni dipeptidyl-peptidase 9 (S09 family) 0.0014 0.0229 0.0421
Echinococcus granulosus ATP dependent DNA helicase Q1 0.0009 0.0061 0.015
Brugia malayi prolyl oligopeptidase family protein 0.0014 0.0229 0.043
Trypanosoma cruzi kinesin, putative 0.0014 0.0234 0.0577
Mycobacterium ulcerans protease II (oligopeptidase B), PtrB 0.0052 0.1481 0.2839
Brugia malayi prolyl oligopeptidase family protein 0.0014 0.0229 0.043
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trypanosoma cruzi cysteine peptidase, Clan CA, family C2, putative 0.002 0.0429 0.1058
Echinococcus granulosus calpain 0.002 0.0429 0.1058
Trypanosoma brucei serine peptidase, Clan SC, Family S9B 0.0014 0.0229 0.0564
Echinococcus multilocularis calpain family protein 1, d 0.0039 0.1047 0.2581
Leishmania major calpain-like cysteine peptidase, putative,cysteine peptidase, Clan CA, family C2, putative 0.002 0.0429 0.0731
Trypanosoma brucei Alpha/beta hydrolase domain-containing protein 0.0014 0.0229 0.0564
Brugia malayi prolyl oligopeptidase family protein 0.0014 0.0229 0.043
Leishmania major calpain, putative,cysteine peptidase, Clan CA, family C2, putative 0.002 0.0429 0.0731
Trypanosoma cruzi oligopeptidase b 0.0052 0.1481 0.3651
Brugia malayi prolyl oligopeptidase family protein 0.0014 0.0229 0.043
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Mycobacterium tuberculosis Probable peptidase 0.0052 0.1481 0.2839
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trypanosoma brucei cysteine peptidase, Clan CA, family C2, putative 0.002 0.0429 0.1058
Trichomonas vaginalis mucin-desulfating sulfatase, putative 0.0008 0.0057 0.1233
Loa Loa (eye worm) calpain 0.002 0.0429 0.0375
Loa Loa (eye worm) calpain family protein 1 0.0039 0.1047 0.0996
Loa Loa (eye worm) hypothetical protein 0.0131 0.4058 0.4024
Leishmania major oligopeptidase B-like protein,serine peptidase, clan SC, family S9A-like protein 0.0052 0.1481 0.3418
Trichomonas vaginalis Clan SC, family S33, methylesterase-like serine peptidase 0.0018 0.0374 0.8138
Brugia malayi calpain family protein 1 0.0053 0.1501 0.361
Trypanosoma cruzi calpain-like cysteine peptidase, putative 0.002 0.0429 0.1058
Trypanosoma cruzi serine peptidase, clan SC, family S9A-like protein, putative 0.0052 0.1481 0.3651
Loa Loa (eye worm) hypothetical protein 0.0033 0.0852 0.08
Leishmania major prolyl oligopeptidase, putative,serine peptidase clan SC, family S9A, putative 0.0131 0.4058 1
Loa Loa (eye worm) hypothetical protein 0.0014 0.0229 0.0173
Echinococcus granulosus calpain 5 0.002 0.0429 0.1058
Loa Loa (eye worm) prolyl oligopeptidase 0.0014 0.0229 0.0173
Echinococcus multilocularis prolyl endopeptidase 0.0131 0.4058 1
Trypanosoma brucei kinesin, putative 0.0014 0.0234 0.0577
Toxoplasma gondii hypothetical protein 0.0014 0.0229 0.0421
Echinococcus granulosus family C2 unassigned peptidase C02 family 0.0055 0.1579 0.3891
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Brugia malayi prolyl oligopeptidase family protein 0.0131 0.4058 1
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Echinococcus multilocularis calpain 5 0.002 0.0429 0.1058
Echinococcus granulosus prolyl endopeptidase 0.0131 0.4058 1
Mycobacterium ulcerans epoxide hydrolase EphA 0.0162 0.5074 1
Echinococcus granulosus dipeptidyl aminopeptidaseprotein 0.0014 0.0229 0.0564
Brugia malayi ATP-dependent DNA helicase, RecQ family protein 0.0009 0.0061 0.001
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trypanosoma brucei Dipeptidyl-peptidase 8-like, putative 0.0014 0.0229 0.0564
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Toxoplasma gondii acylaminoacyl-peptidase, putative 0.0014 0.0229 0.0421
Brugia malayi calpain family protein 1 0.0053 0.1501 0.361
Trichomonas vaginalis DNA helicase recq1, putative 0.0021 0.046 1
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Echinococcus multilocularis acylamino acid releasing enzyme 0.0014 0.0229 0.0564
Trypanosoma cruzi prolyl endopeptidase 0.0131 0.4058 1
Trypanosoma brucei prolyl oligopeptidase, putative 0.0052 0.1481 0.3651
Entamoeba histolytica prolyl oligopeptidase family protein 0.0014 0.0229 0.9771
Echinococcus multilocularis calpain A 0.0055 0.1579 0.3891
Trichomonas vaginalis conserved hypothetical protein 0.0008 0.0057 0.1233
Plasmodium falciparum ADP-dependent DNA helicase RecQ 0.0018 0.0377 1
Loa Loa (eye worm) hypothetical protein 0.0009 0.0061 0.0004
Schistosoma mansoni family C2 unassigned peptidase (C02 family) 0.0055 0.1579 0.3799
Echinococcus granulosus bloom syndrome protein 0.0021 0.046 0.1133
Trypanosoma cruzi calpain-like cysteine peptidase, putative 0.002 0.0429 0.1058
Giardia lamblia Alanyl dipeptidyl peptidase 0.0014 0.0229 1

Activities

Activity type Activity value Assay description Source Reference
IC50 (functional) 0 Inhibition of calpain I in C2C12 myoblasts loaded with Suc-Leu-Tyr-AMC ChEMBL. 16185867
IC50 (binding) > 1 uM Inhibitory activity against porcine calpain I using Suc-Leu-Tyr-AMC fluorogenic substrate ChEMBL. 16185867
IC50 (binding) > 1 uM Inhibitory activity against porcine calpain I using Suc-Leu-Tyr-AMC fluorogenic substrate ChEMBL. 16185867

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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