Detailed information for compound 408087

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 1394.56 | Formula: C69H88FN19O12
  • H donors: 18 H acceptors: 12 LogP: 0.64 Rotable bonds: 31
    Rule of 5 violations (Lipinski): 4
  • SMILES: CC(C[C@@H]1NC(=O)[C@H](CCCN=C(N)N)NC(=O)[C@H](Cc2ccc(cc2)O)NC(=O)[C@H](CNC(=O)C[C@H](NC(=O)[C@@H](NC1=O)CCCN=C(N)N)C(=O)NCC(=O)N)NC(=O)[C@H](Cc1c[nH]c2c1cccc2)NC(=O)[C@@H](NC(=O)[C@H](Cc1ccc2c(c1)cccc2)N)Cc1ccc(cc1)F)C
  • InChi: 1S/C69H88FN19O12/c1-37(2)27-51-63(97)82-50(14-8-26-78-69(75)76)62(96)88-55(60(94)81-36-57(72)91)33-58(92)80-35-56(67(101)86-53(31-39-18-23-45(90)24-19-39)64(98)83-49(61(95)85-51)13-7-25-77-68(73)74)89-66(100)54(32-43-34-79-48-12-6-5-11-46(43)48)87-65(99)52(30-38-16-21-44(70)22-17-38)84-59(93)47(71)29-40-15-20-41-9-3-4-10-42(41)28-40/h3-6,9-12,15-24,28,34,37,47,49-56,79,90H,7-8,13-14,25-27,29-33,35-36,71H2,1-2H3,(H2,72,91)(H,80,92)(H,81,94)(H,82,97)(H,83,98)(H,84,93)(H,85,95)(H,86,101)(H,87,99)(H,88,96)(H,89,100)(H4,73,74,77)(H4,75,76,78)/t47-,49-,50-,51-,52-,53-,54-,55-,56-/m0/s1
  • InChiKey: PJNDZLUDICXXLR-FQUIVGLRSA-N  

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Rattus norvegicus Gonadotropin-releasing hormone receptor Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Brugia malayi GnHR receptor homolog Get druggable targets OG5_131719 All targets in OG5_131719

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Onchocerca volvulus Gonadotropin-releasing hormone receptor   327 aa 336 aa 19.0 %
Echinococcus multilocularis allatostatin A receptor Gonadotropin-releasing hormone receptor   327 aa 279 aa 23.7 %
Brugia malayi ORL1-like opioid receptor Gonadotropin-releasing hormone receptor   327 aa 293 aa 20.8 %
Onchocerca volvulus Gonadotropin-releasing hormone receptor   327 aa 271 aa 20.7 %
Echinococcus granulosus tachykinin peptides receptor 99D Gonadotropin-releasing hormone receptor   327 aa 283 aa 19.1 %
Echinococcus granulosus tm gpcr rhodopsin Gonadotropin-releasing hormone receptor   327 aa 299 aa 23.1 %
Schistosoma mansoni neuropeptide receptor Gonadotropin-releasing hormone receptor   327 aa 263 aa 24.0 %
Onchocerca volvulus E3 ubiquitin-protein ligase rpm-1 homolog Gonadotropin-releasing hormone receptor   327 aa 288 aa 27.8 %
Schistosoma japonicum Alpha-1A adrenergic receptor, putative Gonadotropin-releasing hormone receptor   327 aa 290 aa 19.7 %
Onchocerca volvulus Mitochondrial inner membrane protein homolog Gonadotropin-releasing hormone receptor   327 aa 288 aa 24.3 %
Onchocerca volvulus Gonadotropin-releasing hormone receptor   327 aa 284 aa 19.4 %
Echinococcus multilocularis tachykinin peptides receptor 99D Gonadotropin-releasing hormone receptor   327 aa 283 aa 20.1 %
Schistosoma japonicum 5-hydroxytryptamine receptor 4, putative Gonadotropin-releasing hormone receptor   327 aa 305 aa 24.9 %
Onchocerca volvulus Gonadotropin-releasing hormone receptor   327 aa 292 aa 19.5 %
Schistosoma mansoni peptide (allatostatin)-like receptor Gonadotropin-releasing hormone receptor   327 aa 272 aa 23.2 %
Onchocerca volvulus Ubiquinol-cytochrome-c reductase complex assembly factor 1 homolog Gonadotropin-releasing hormone receptor   327 aa 273 aa 19.8 %
Echinococcus granulosus allatostatin A receptor Gonadotropin-releasing hormone receptor   327 aa 284 aa 22.9 %
Loa Loa (eye worm) hypothetical protein Gonadotropin-releasing hormone receptor   327 aa 334 aa 21.6 %
Schistosoma japonicum ko:K04135 adrenergic receptor, alpha 1a, putative Gonadotropin-releasing hormone receptor   327 aa 343 aa 21.6 %
Echinococcus multilocularis neuropeptide receptor Gonadotropin-releasing hormone receptor   327 aa 263 aa 20.9 %
Onchocerca volvulus Gonadotropin-releasing hormone receptor   327 aa 336 aa 20.8 %
Schistosoma japonicum ko:K04209 neuropeptide Y receptor, invertebrate, putative Gonadotropin-releasing hormone receptor   327 aa 263 aa 23.2 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Loa Loa (eye worm) hypothetical protein 0.023 0.0161 0.0955
Echinococcus multilocularis protein farnesyltransferase alpha subunit 0.023 0.0161 0.0161
Trichomonas vaginalis protein farnesyltransferase alpha subunit, putative 0.023 0.0161 1
Loa Loa (eye worm) hypothetical protein 0.0839 0.1683 1
Echinococcus multilocularis protein farnesyltransferase subunit beta 0.0208 0.0107 0.0107
Echinococcus granulosus protein farnesyltransferase alpha subunit 0.023 0.0161 0.0161
Trichomonas vaginalis type I geranylgeranyltransferase beta subunit, putative 0.0208 0.0107 0.6646
Trichomonas vaginalis protein farnesyltransferase alpha subunit/RAB geranylgeranyl transferase alpha subunit, putative 0.023 0.0161 1
Trichomonas vaginalis geranylgeranyl transferase type II beta subunit, putative 0.0208 0.0107 0.6646
Plasmodium vivax prenyltransferase alpha subunit, putative 0.023 0.0161 1
Trichomonas vaginalis geranylgeranyl transferase type II beta subunit, putative 0.0208 0.0107 0.6646
Brugia malayi Cache domain containing protein 0.0839 0.1683 1
Trypanosoma brucei protein farnesyltransferase beta subunit 0.0208 0.0107 1
Trichomonas vaginalis geranylgeranyl transferase type beta subunit, putative 0.0208 0.0107 0.6646
Trypanosoma cruzi protein farnesyltransferase, putative 0.0208 0.0107 1
Schistosoma mansoni protein farnesyltransferase alpha subunit 0.023 0.0161 0.0389
Trichomonas vaginalis geranylgeranyl transferase type II beta subunit, putative 0.0208 0.0107 0.6646
Toxoplasma gondii prenyltransferase and squalene oxidase repeat-containing protein 0.0208 0.0107 0.5
Giardia lamblia Rab geranylgeranyltransferase 0.023 0.0161 1
Brugia malayi GnHR receptor homolog 0.0618 0.1131 0.6719
Echinococcus multilocularis voltage dependent calcium channel subunit 0.4168 1 1
Echinococcus granulosus protein farnesyltransferase subunit beta 0.0208 0.0107 0.0107
Loa Loa (eye worm) prenyltransferase alpha subunit repeat containing protein 0.023 0.0161 0.0955
Schistosoma mansoni serine-rich repeat protein 0.0979 0.2033 0.4923
Brugia malayi Prenyltransferase and squalene oxidase repeat family protein 0.0208 0.0107 0.0634
Schistosoma mansoni dihydropyridine-sensitive l-type calcium channel 0.1818 0.4129 1
Brugia malayi Protein prenyltransferase alpha subunit repeat containing protein 0.023 0.0161 0.0955
Echinococcus granulosus voltage dependent calcium channel subunit 0.1896 0.4323 0.4323
Schistosoma mansoni hypothetical protein 0.0979 0.2033 0.4923
Leishmania major farnesyltransferase beta subunit 0.0208 0.0107 0.5
Schistosoma mansoni dihydropyridine-sensitive l-type calcium channel 0.0917 0.1877 0.4545
Trichomonas vaginalis geranylgeranyl transferase type I beta subunit, putative 0.0208 0.0107 0.6646
Trypanosoma cruzi protein farnesyltransferase, putative 0.0208 0.0107 1
Entamoeba histolytica protein farnesyltransferase beta subunit, putative 0.0208 0.0107 0.6646
Loa Loa (eye worm) prenyltransferase and squalene oxidase repeat family protein 0.0208 0.0107 0.0634
Mycobacterium tuberculosis Halimadienyl diphosphate synthase 0.0174 0.0022 0.5
Plasmodium falciparum protein farnesyltransferase subunit alpha 0.023 0.0161 1
Echinococcus multilocularis voltage dependent calcium channel subunit 0.1896 0.4323 0.4323
Schistosoma mansoni protein farnesyltransferase subunit beta 0.0208 0.0107 0.0259
Entamoeba histolytica protein farnesyltransferase alpha subunit, putative 0.023 0.0161 1
Trichomonas vaginalis protein farnesyltransferase alpha subunit, putative 0.023 0.0161 1

Activities

Activity type Activity value Assay description Source Reference
Dose (functional) = 2000 ug In vivo antiovualtory assay (AOA) carried out in corn oil ChEMBL. 3279211
Kd (binding) > 100 nM Inhibitory binding constant for Gonadotropin-releasing hormone receptor ChEMBL. 3279211
Kd (binding) > 100 nM Inhibitory binding constant for Gonadotropin-releasing hormone receptor ChEMBL. 3279211
Relative potency (functional) < 0.001 Inhibition of GnRH-stimulated LH secretion by cultured dispersed anterior pituitary cells ChEMBL. 3279211
Relative potency (functional) < 0.001 Inhibition of GnRH-stimulated LH secretion by cultured dispersed anterior pituitary cells ChEMBL. 3279211

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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