Detailed information for compound 35117

Basic information

Technical information
  • TDR Targets ID: 35117
  • Name: 1,3-dimethyl-8-[(E)-2-(3-nitrophenyl)ethenyl] -7H-purine-2,6-dione
  • MW: 327.295 | Formula: C15H13N5O4
  • H donors: 1 H acceptors: 5 LogP: 1.75 Rotable bonds: 3
    Rule of 5 violations (Lipinski): 1
  • SMILES: [O-][N+](=O)c1cccc(c1)/C=C/c1nc2c([nH]1)n(C)c(=O)n(c2=O)C
  • InChi: 1S/C15H13N5O4/c1-18-13-12(14(21)19(2)15(18)22)16-11(17-13)7-6-9-4-3-5-10(8-9)20(23)24/h3-8H,1-2H3,(H,16,17)/b7-6+
  • InChiKey: OYYRSMIKUMPQPY-VOTSOKGWSA-N  

Network

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Synonyms

  • 1,3-dimethyl-8-[(E)-2-(3-nitrophenyl)vinyl]-7H-purine-2,6-dione
  • 1,3-dimethyl-8-[(E)-2-(3-nitrophenyl)vinyl]-7H-purine-2,6-quinone

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Rattus norvegicus Adenosine A2 receptor Starlite/ChEMBL References
Rattus norvegicus Adenosine A1 receptor Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Onchocerca volvulus Ubiquinol-cytochrome-c reductase complex assembly factor 1 homolog Adenosine A1 receptor   326 aa 286 aa 22.7 %
Loa Loa (eye worm) hypothetical protein Adenosine A1 receptor   326 aa 300 aa 24.3 %
Schistosoma mansoni neuropeptide receptor Adenosine A1 receptor   326 aa 311 aa 21.2 %
Echinococcus multilocularis thyrotropin releasing hormone receptor Adenosine A1 receptor   326 aa 321 aa 22.7 %
Loa Loa (eye worm) neuropeptide F receptor Adenosine A1 receptor   326 aa 316 aa 19.9 %
Schistosoma mansoni peptide (allatostatin)-like receptor Adenosine A1 receptor   326 aa 327 aa 24.8 %
Schistosoma mansoni neuropeptide receptor Adenosine A1 receptor   326 aa 274 aa 22.6 %
Schistosoma japonicum 5-hydroxytryptamine receptor 4, putative Adenosine A1 receptor   326 aa 286 aa 26.9 %
Onchocerca volvulus Adenosine A1 receptor   326 aa 306 aa 21.2 %
Schistosoma mansoni dro/myosuppressin receptor Adenosine A1 receptor   326 aa 326 aa 22.1 %
Brugia malayi hypothetical protein Adenosine A1 receptor   326 aa 305 aa 21.0 %
Echinococcus multilocularis neuropeptide receptor Adenosine A1 receptor   326 aa 299 aa 22.4 %
Onchocerca volvulus Adenosine A1 receptor   326 aa 304 aa 21.1 %
Schistosoma japonicum ko:K04136 adrenergic receptor, alpha 1b, putative Adenosine A2 receptor   410 aa 366 aa 25.4 %
Schistosoma mansoni biogenic amine (5HT) receptor Adenosine A2 receptor   410 aa 399 aa 28.1 %
Echinococcus granulosus thyrotropin releasing hormone receptor Adenosine A1 receptor   326 aa 321 aa 23.1 %
Onchocerca volvulus Mitochondrial inner membrane protein homolog Adenosine A2 receptor   410 aa 340 aa 27.9 %
Schistosoma japonicum ko:K04134 cholinergic receptor, invertebrate, putative Adenosine A1 receptor   326 aa 317 aa 24.6 %
Echinococcus granulosus neuropeptide receptor Adenosine A1 receptor   326 aa 299 aa 22.4 %
Schistosoma japonicum ko:K04135 adrenergic receptor, alpha 1a, putative Adenosine A2 receptor   410 aa 346 aa 28.3 %
Schistosoma japonicum Alpha-1A adrenergic receptor, putative Adenosine A1 receptor   326 aa 295 aa 28.1 %
Onchocerca volvulus Adenosine A2 receptor   410 aa 356 aa 23.9 %
Onchocerca volvulus Adenosine A1 receptor   326 aa 323 aa 20.7 %
Onchocerca volvulus Adenosine A2 receptor   410 aa 337 aa 23.1 %
Echinococcus multilocularis allatostatin A receptor Adenosine A1 receptor   326 aa 303 aa 24.1 %
Echinococcus granulosus allatostatin A receptor Adenosine A1 receptor   326 aa 303 aa 24.1 %
Schistosoma japonicum ko:K04209 neuropeptide Y receptor, invertebrate, putative Adenosine A1 receptor   326 aa 315 aa 21.6 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Trichomonas vaginalis CMGC family protein kinase 0.0062 0.0696 0.0754
Trichomonas vaginalis ral, putative 0.0059 0.0653 0.0638
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0298 0.4123 1
Loa Loa (eye worm) hypothetical protein 0.0059 0.0653 0.2246
Trypanosoma cruzi DNA polymerase eta, putative 0.0015 0.0021 0.0048
Entamoeba histolytica ras-1, putative 0.0059 0.0653 0.1542
Schistosoma mansoni single-minded 0.005 0.0524 0.0516
Brugia malayi glutathione reductase 0.0039 0.0364 0.1239
Giardia lamblia Fructose-bisphosphate aldolase 0.0298 0.4123 1
Schistosoma mansoni aryl hydrocarbon receptor 0.005 0.0524 0.0516
Echinococcus multilocularis DNA topoisomerase 1 0.0193 0.2593 0.2587
Loa Loa (eye worm) hypothetical protein 0.0167 0.2216 0.7689
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Mycobacterium tuberculosis Probable membrane NADH dehydrogenase NdhA 0.0088 0.108 0.4962
Leishmania major DNA polymerase eta, putative 0.0015 0.0021 0.0048
Onchocerca volvulus 0.003 0.0246 0.0722
Brugia malayi MAP kinase sur-1 0.0062 0.0696 0.2395
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Loa Loa (eye worm) hypothetical protein 0.0032 0.0268 0.0904
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.0268 0.0582
Echinococcus multilocularis mitogen activated protein kinase 3 0.0062 0.0696 0.0688
Brugia malayi DNA topoisomerase I 0.0193 0.2593 0.9002
Trypanosoma brucei DNA polymerase kappa, putative 0.0017 0.0052 0.0074
Trichomonas vaginalis rap1 and, putative 0.0059 0.0653 0.0638
Mycobacterium tuberculosis Probable dehydrogenase 0.0088 0.108 0.4962
Echinococcus granulosus dna polymerase kappa 0.0042 0.0417 0.0409
Mycobacterium ulcerans fructose-bisphosphate aldolase 0.0146 0.1914 0.8675
Trypanosoma brucei unspecified product 0.0035 0.0318 0.0701
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Echinococcus multilocularis histone lysine methyltransferase setb histone lysine methyltransferase eggless 0.003 0.0246 0.0238
Schistosoma mansoni histone-lysine n-methyltransferase setb1 0.003 0.0246 0.0238
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Entamoeba histolytica fructose-1,6-bisphosphate aldolase, putative 0.0298 0.4123 1
Brugia malayi Thioredoxin reductase 0.0039 0.0364 0.1239
Trypanosoma cruzi DNA polymerase beta thumb, putative 0.0043 0.0433 0.1014
Trypanosoma brucei DNA polymerase IV, putative 0.0042 0.0417 0.0932
Trypanosoma cruzi mitochondrial DNA polymerase beta-PAK, putative 0.0146 0.1917 0.4492
Toxoplasma gondii hypothetical protein 0.005 0.0525 0.1187
Schistosoma mansoni rab geranylgeranyl transferase alpha subunit 0.0015 0.0021 0.0012
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0298 0.4123 1
Mycobacterium tuberculosis NADPH-dependent mycothiol reductase Mtr 0.0039 0.0364 0.1608
Loa Loa (eye worm) hypothetical protein 0.0015 0.0021 0.0043
Trichomonas vaginalis GTP-binding protein rit, putative 0.0059 0.0653 0.0638
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Trypanosoma cruzi mitogen activated protein kinase 4, putative 0.0062 0.0696 0.1631
Mycobacterium tuberculosis Probable NADH dehydrogenase Ndh 0.0088 0.108 0.4962
Mycobacterium tuberculosis Dihydrolipoamide dehydrogenase LpdC (lipoamide reductase (NADH)) (lipoyl dehydrogenase) (dihydrolipoyl dehydrogenase) (diaphoras 0.0098 0.1222 0.5629
Brugia malayi bHLH-PAS transcription factor 0.0037 0.0337 0.1145
Mycobacterium ulcerans DNA polymerase IV 0.0042 0.0417 0.0437
Loa Loa (eye worm) hypothetical protein 0.003 0.0246 0.0828
Mycobacterium ulcerans hypothetical protein 0.0162 0.2155 1
Echinococcus granulosus ras gtpase 0.0059 0.0653 0.0645
Mycobacterium tuberculosis Putative ferredoxin reductase 0.0088 0.108 0.4962
Brugia malayi polk-prov protein 0.0032 0.0268 0.0904
Leishmania major DNA topoisomerase type IB small subunit 0.0048 0.0506 0.1185
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0298 0.4123 1
Treponema pallidum fructose-bisphosphate aldolase 0.0298 0.4123 0.5
Trypanosoma cruzi DNA topoisomerase type IB small subunit, putative 0.0048 0.0506 0.1185
Trypanosoma brucei DNA polymerase kappa, putative 0.0017 0.0052 0.0074
Echinococcus multilocularis ras gtpase 0.0059 0.0653 0.0645
Echinococcus multilocularis histone lysine N methyltransferase SETMAR 0.003 0.0246 0.0238
Trichomonas vaginalis dexras1, putative 0.0059 0.0653 0.0638
Trypanosoma brucei DNA polymerase beta thumb, putative 0.0043 0.0433 0.097
Echinococcus granulosus single minded 2 0.0037 0.0337 0.0329
Mycobacterium leprae Probable fructose bisphosphate aldolase Fba 0.0146 0.1914 1
Trypanosoma brucei mitogen activated protein kinase 4, putative 0.0062 0.0696 0.1591
Echinococcus granulosus mitogen activated protein kinase 0.0062 0.0696 0.0688
Onchocerca volvulus 0.0037 0.0337 0.0997
Echinococcus multilocularis dna polymerase kappa 0.0042 0.0417 0.0409
Plasmodium vivax thioredoxin reductase, putative 0.0039 0.0364 0.0502
Loa Loa (eye worm) glutathione reductase 0.0039 0.0364 0.1239
Loa Loa (eye worm) CMGC/MAPK/ERK1 protein kinase 0.0062 0.0696 0.2395
Trypanosoma brucei mitochondrial DNA polymerase beta-PAK 0.0146 0.1917 0.4465
Leishmania major DNA polymerase kappa, putative,DNA polymerase IV, putative 0.0022 0.0119 0.0279
Echinococcus multilocularis terminal deoxycytidyl transferase rev1 0.0015 0.0021 0.0012
Loa Loa (eye worm) Ras protein let-60 0.0059 0.0653 0.2246
Brugia malayi ImpB/MucB/SamB family protein 0.0015 0.0021 0.0043
Echinococcus granulosus DNA topoisomerase 1 0.0193 0.2593 0.2587
Mycobacterium ulcerans DNA polymerase IV 0.0042 0.0417 0.0437
Mycobacterium leprae DIHYDROLIPOAMIDE DEHYDROGENASE LPD (LIPOAMIDE REDUCTASE (NADH)) (LIPOYL DEHYDROGENASE) (DIHYDROLIPOYL DEHYDROGENASE) (DIAPHORASE 0.0098 0.1222 0.1705
Trypanosoma cruzi DNA polymerase kappa, putative 0.0042 0.0417 0.0976
Plasmodium vivax glutathione reductase, putative 0.0039 0.0364 0.0502
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0298 0.4123 1
Trypanosoma cruzi mitogen activated protein kinase 2, putative 0.0062 0.0696 0.1631
Echinococcus multilocularis dna polymerase eta 0.0015 0.0021 0.0012
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.0268 0.0582
Mycobacterium tuberculosis Probable reductase 0.0088 0.108 0.4962
Mycobacterium tuberculosis Conserved hypothetical protein 0.0162 0.2155 1
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Trypanosoma cruzi mitochondrial DNA polymerase beta-PAK, putative 0.0043 0.0433 0.1014
Loa Loa (eye worm) thioredoxin reductase 0.0039 0.0364 0.1239
Trypanosoma cruzi DNA polymerase kappa, putative 0.0042 0.0417 0.0976
Echinococcus granulosus 5'partial|histone lysine N methyltransferase SETDB2 0.0029 0.023 0.0222
Trypanosoma cruzi mitogen-activated protein kinase 11, putative 0.0062 0.0696 0.1631
Trichomonas vaginalis CMGC family protein kinase 0.0062 0.0696 0.0754
Echinococcus multilocularis mitogen activated protein kinase 0.0062 0.0696 0.0688
Brugia malayi PAS domain containing protein 0.005 0.0524 0.1795
Trypanosoma brucei DNA topoisomerase IB, large subunit 0.0144 0.1893 0.4408
Trichomonas vaginalis rheb, putative 0.0059 0.0653 0.0638
Plasmodium falciparum topoisomerase I 0.0193 0.2593 1
Loa Loa (eye worm) ImpB/MucB/SamB family protein 0.0015 0.0021 0.0043
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Trypanosoma brucei DNA polymerase IV, putative 0.0035 0.0318 0.0701
Leishmania major mitochondrial DNA polymerase beta-PAK, putative 0.0146 0.1917 0.4492
Brugia malayi Pre-SET motif family protein 0.0212 0.288 1
Loa Loa (eye worm) pre-SET domain-containing protein family protein 0.0212 0.288 1
Mycobacterium tuberculosis Probable fructose-bisphosphate aldolase Fba 0.0146 0.1914 0.8871
Giardia lamblia Kinase, CMGC MAPK 0.0062 0.0696 0.1441
Schistosoma mansoni histone-lysine n-methyltransferase setb1 0.003 0.0246 0.0238
Echinococcus multilocularis microtubule associated protein 2 0.0704 1 1
Trichomonas vaginalis CMGC family protein kinase 0.0062 0.0696 0.0754
Schistosoma mansoni terminal deoxycytidyl transferase 0.0015 0.0021 0.0012
Schistosoma mansoni DNA topoisomerase type I 0.0144 0.1893 0.1886
Schistosoma mansoni histone-lysine n-methyltransferase suv9 0.003 0.0246 0.0238
Trichomonas vaginalis set domain proteins, putative 0.0242 0.3305 0.7792
Echinococcus granulosus mitogen activated protein kinase 3 0.0062 0.0696 0.0688
Plasmodium vivax topoisomerase I, putative 0.0193 0.2593 1
Trypanosoma cruzi DNA topoisomerase IB, large subunit, putative 0.0144 0.1893 0.4435
Leishmania major mitogen activated protein kinase 4, putative;with=GeneDB:LmxM19.1440 0.0062 0.0696 0.1631
Mycobacterium tuberculosis Probable nitrite reductase [NAD(P)H] large subunit [FAD flavoprotein] NirB 0.0088 0.108 0.4962
Toxoplasma gondii CMGC kinase, MAPK family (ERK) MAPK-1 0.0062 0.0696 0.1917
Trichomonas vaginalis CMGC family protein kinase 0.0062 0.0696 0.0754
Leishmania major mitogen activated protein kinase, putative,map kinase, putative 0.0062 0.0696 0.1631
Trypanosoma cruzi DNA polymerase kappa, putative 0.0042 0.0417 0.0976
Echinococcus multilocularis transfer RNA-Lys 0.0037 0.0337 0.0329
Echinococcus granulosus histone lysine methyltransferase setb 0.003 0.0246 0.0238
Leishmania major mitochondrial DNA polymerase beta 0.0308 0.4267 1
Trypanosoma cruzi trypanothione reductase, putative 0.0039 0.0364 0.0853
Echinococcus multilocularis thioredoxin glutathione reductase 0.0039 0.0371 0.0363
Trypanosoma cruzi DNA polymerase kappa, putative 0.0042 0.0417 0.0976
Brugia malayi ImpB/MucB/SamB family protein 0.0015 0.0021 0.0043
Leishmania major trypanothione reductase 0.0039 0.0364 0.0853
Trypanosoma cruzi mitochondrial DNA polymerase beta-PAK, putative 0.0053 0.057 0.1335
Loa Loa (eye worm) DNA topoisomerase I 0.0193 0.2593 0.9002
Mycobacterium tuberculosis Probable oxidoreductase 0.0098 0.1222 0.5629
Trypanosoma brucei DNA polymerase kappa, putative 0.0022 0.0119 0.0231
Mycobacterium tuberculosis Possible DNA-damage-inducible protein P DinP (DNA polymerase V) (pol IV 2) (DNA nucleotidyltransferase (DNA-directed)) 0.0022 0.0119 0.046
Schistosoma mansoni DNA polymerase eta 0.0015 0.0021 0.0012
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0298 0.4123 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0298 0.4123 1
Schistosoma mansoni DNA topoisomerase type I 0.0193 0.2593 0.2587
Toxoplasma gondii thioredoxin reductase 0.0039 0.0364 0.0502
Mycobacterium tuberculosis NAD(P)H quinone reductase LpdA 0.0098 0.1222 0.5629
Entamoeba histolytica Ras family GTPase 0.0059 0.0653 0.1542
Echinococcus granulosus thioredoxin glutathione reductase 0.0039 0.0371 0.0363
Entamoeba histolytica Ras family GTPase 0.0059 0.0653 0.1542
Schistosoma mansoni histone-lysine n-methyltransferase setb1 0.003 0.0246 0.0238
Onchocerca volvulus 0.0242 0.3305 1
Leishmania major DNA topoisomerase IB, large subunit 0.0144 0.1893 0.4435
Trypanosoma brucei mitochondrial DNA polymerase beta 0.0308 0.4267 1
Toxoplasma gondii DNA topoisomerase I, putative 0.0193 0.2593 1
Brugia malayi hypoxia-induced factor 1 0.0154 0.2029 0.7039
Brugia malayi Ras protein let-60 0.0059 0.0653 0.2246
Echinococcus granulosus terminal deoxycytidyl transferase rev1 0.0015 0.0021 0.0012
Brugia malayi hypothetical protein 0.0167 0.2216 0.7689
Trichomonas vaginalis ras-dva small GTPase, putative 0.0059 0.0653 0.0638
Schistosoma mansoni serine/threonine protein kinase 0.0062 0.0696 0.0688
Leishmania major DNA polymerase kappa, putative 0.0022 0.0119 0.0279
Trypanosoma brucei DNA topoisomerase type IB small subunit 0.0048 0.0506 0.1142
Trypanosoma brucei protein kinase, putative 0.0062 0.0696 0.1591
Brugia malayi Ras-related protein R-Ras2 0.0059 0.0653 0.2246
Loa Loa (eye worm) hypoxia-induced factor 1 0.0154 0.2029 0.7039
Schistosoma mansoni DNA topoisomerase type I 0.0144 0.1893 0.1886
Trypanosoma cruzi mitochondrial DNA polymerase beta, putative 0.0308 0.4267 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0298 0.4123 1
Trypanosoma brucei DNA polymerase kappa, putative 0.0017 0.0052 0.0074
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0298 0.4123 1
Trypanosoma cruzi DNA polymerase beta thumb, putative 0.0043 0.0433 0.1014
Trypanosoma brucei trypanothione reductase 0.0039 0.0364 0.0809
Trypanosoma brucei DNA polymerase kappa, putative 0.0042 0.0417 0.0932
Trypanosoma brucei DNA polymerase IV, putative 0.0042 0.0417 0.0932
Brugia malayi Pre-SET motif family protein 0.003 0.0246 0.0828
Trypanosoma cruzi mitogen-activated protein kinase 11, putative 0.0062 0.0696 0.1631
Trypanosoma cruzi mitochondrial DNA polymerase beta, putative 0.0308 0.4267 1
Echinococcus granulosus dna polymerase eta 0.0015 0.0021 0.0012
Entamoeba histolytica fructose-1,6-bisphosphate aldolase, putative 0.0298 0.4123 1
Schistosoma mansoni microtubule-associated protein tau 0.0704 1 1

Activities

Activity type Activity value Assay description Source Reference
Ki (binding) = 438 nM Binding affinity against adenosine A2 receptor in rat brain using [3H]- CGS 21680 as radioligand ChEMBL. 8496902
Ki (binding) = 438 nM Binding affinity against adenosine A2 receptor in rat brain using [3H]- CGS 21680 as radioligand ChEMBL. 8496902
Ki (binding) = 1060 nM Affinity against Adenosine A1 receptor in rat brain using [3H]- PIA as radioligand ChEMBL. 8496902
Ki (binding) = 1060 nM Affinity against Adenosine A1 receptor in rat brain using [3H]- PIA as radioligand ChEMBL. 8496902
Ratio (binding) = 2.4 Ratio between Ki of adenosine A1 receptor to that of adenosine A2 receptor ChEMBL. 8496902

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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